Plant Transcription factor database - CTBE
version: 3.0

Gene model: evm.TU.supercontig_3.342

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_3.342
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT5G16560.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g33050.1 Score: 1

Physcomitrella patens

159080 Score: 1

Populus trichocarpa

827763 Score: 1

Sorghum bicolor

5045404 Score: 1

Expression data

Expressed Sequence Tags

At.25340
Arabidopsis thaliana KAN2 (KANADI 2); DNA binding / transcription factor (KAN2) mRNA, complete cds /cds=p(272,1438) /gb=NM_102957
Pba.6907
WS02536.B21_E12 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02536_E12 3', mRNA sequence /clone=WS02536_E12 /clone_end=3' /gb=DT488382
Pth.6907
WS02536.B21_E12 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02536_E12 3', mRNA sequence /clone=WS02536_E12 /clone_end=3' /gb=DT488382

Domain Architecture

G2-like G2-like evm.TU.supercontig_3.342
DomainStartEndBit scoreE-value
Myb_DNA-binding24429543.58.1e-10
G2-like24729561.25.5e-18

Sequences