Plant Transcription factor database - CTBE
version: 3.0

Gene model: evm.TU.supercontig_27.192

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_27.192
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os09g12750.1 Score: 1

Populus trichocarpa

785023 Score: 1

Vitis vinifera

GSVIVP00011845001 Score: 1

Zea mays

GRMZM2G113742_P01 Score: 1

Expression data

Expressed Sequence Tags

Hv.12075
HV_CEb0020G12f Hordeum vulgare seedling green leaf EST library HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEb0020G12f, mRNA sequence /clone=HV_CEb0020G12f /gb=BE558795
Mtr.11460
AC3671 NOLLY Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=DY617558
Mtr.15614
NF102H07EC1F1062 Elicited cell culture Medicago truncatula cDNA clone NF102H07EC 5', mRNA sequence /clone=NF102H07EC /clone_end=5' /gb=BF651193
Mtr.19692
Medicago truncatula clone MTYF5_F6_F7_F81G-N-14 unknown mRNA /cds=p(177,1121) /gb=BT051559
Mtr.22841
Medicago truncatula clone MTYFD_FE_FF_FG1G-O-4 unknown mRNA /cds=m(89,1126) /gb=BT052638
Os.15464
RECm0256 A normalized whole-life-cycle cDNA library of rice Oryza sativa (indica cultivar-group) cDNA clone BI027I04, BI075P20, BI106D17, BI125D14 5', mRNA sequence /clone=BI027I04,_BI075P20,_BI106D17,_BI125D14 /clone_end=5' /gb=CX099620
Os.24699
Oryza sativa Japonica Group cDNA clone:001-028-A10, full insert sequence /cds=p(432,1298) /gb=AK059448
Os.50003
Oryza sativa Japonica Group cDNA clone:002-117-C12, full insert sequence /gb=AK119588
Os.79800
Oryza sativa (japonica cultivar-group) Os02g0174000 (Os02g0174000) mRNA, complete cds /cds=p(1,1152) /gb=NM_001052580
Pba.3958
Q060C05 Populus flower cDNA library Populus trichocarpa cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU873815
Ppa.20051
CAYY4734.fwd CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens subsp. patens cDNA clone CAYY4734 5', mRNA sequence /clone=CAYY4734 /clone_end=5' /gb=FC366443
Pth.1872
Populus trichocarpa clone WS01214_H04 unknown mRNA /cds=p(155,1084) /gb=EF146817
Pth.3958
Q060C05 Populus flower cDNA library Populus trichocarpa cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU873815
Ptp.4282
T063H04 Populus apical shoot cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU834640
Vvi.19363
VVI009B10_584200 CabSau Flower Stage 12 (FLOu0012) Vitis vinifera cDNA clone VVI009B10 5, mRNA sequence /clone=VVI009B10 /clone_end=5' /gb=DT017180
Vvi.23824
sT7aVVM008G19074 VVM Vitis vinifera cDNA clone VVM008G19074 5' similar to emb_CAO23688.1 unnamed protein product [Vitis vinifera]. Expect = 4e-56, mRNA sequence /clone=VVM008G19074 /clone_end=5' /gb=FC063919

Domain Architecture

G2-like G2-like evm.TU.supercontig_27.192
DomainStartEndBit scoreE-value
Myb_DNA-binding489943.39.2e-10
G2-like519964.55.9e-19

Sequences