Plant Transcription factor database - CTBE
version: 3.0

Gene model: evm.TU.supercontig_27.191

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_27.191
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

484011 Score: 1

Arabidopsis thaliana

AT2G01060.1 Score: 1

Micromonas pusilla CCMP1545

61323 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g12770.1 Score: 1

Populus trichocarpa

828115 Score: 1

Sorghum bicolor

5051025 Score: 1

Zea mays

GRMZM2G143881_P01 Score: 1
GRMZM2G173943_P02 Score: 1

Expression data

Expressed Sequence Tags

At.24449
Arabidopsis thaliana myb family transcription factor (AT2G01060) mRNA, complete cds /cds=p(541,1254) /gb=NM_201656
Mtr.10993
Medicago truncatula clone MTYFD_FE_FF_FG1G-F-19 unknown mRNA /cds=p(94,1086) /gb=BT052374
Mtr.12360
AC2769 NOLLY Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=DY617082
Os.13978
Oryza sativa Japonica Group cDNA clone:J023012H08, full insert sequence /cds=p(326,1099) /gb=AK069306
Os.14719
Oryza sativa Japonica Group cDNA clone:J033123H06, full insert sequence /cds=p(314,1180) /gb=AK103241
Os.24994
Oryza sativa Japonica Group cDNA clone:001-116-C05, full insert sequence /cds=p(352,1638) /gb=AK063486
Os.47566
Oryza sativa (japonica cultivar-group) Os08g0346500 (Os08g0346500) mRNA, complete cds /cds=p(1,924) /gb=NM_001068140
Os.7599
Oryza sativa Japonica Group cDNA clone:J023114F03, full insert sequence /cds=p(162,1151) /gb=AK071731
Pba.1402
WS02519.BR_I07 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02519_I07 5', mRNA sequence /clone=WS02519_I07 /clone_end=5' /gb=DT477286
Pba.733
WS02518.B21_N10 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02518_N10 3', mRNA sequence /clone=WS02518_N10 /clone_end=3' /gb=CV243423
Ppa.13177
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_233986) mRNA, complete cds /cds=p(1,1566) /gb=XM_001769164
Ppa.2695
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_163773) mRNA, complete cds /cds=p(224,1507) /gb=XM_001763286
Ppa.3238
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_171678) mRNA, complete cds /cds=p(1,2136) /gb=XM_001781505
Ppa.4715
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_170944) mRNA, complete cds /cds=p(1,2388) /gb=XM_001779951
Pth.733
WS02518.B21_N10 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02518_N10 3', mRNA sequence /clone=WS02518_N10 /clone_end=3' /gb=CV243423
Ptp.902
C005P11.3pR Populus strain T89 leaves Populus tremula x Populus tremuloides cDNA clone C005P11 3', mRNA sequence /clone=C005P11 /clone_end=3' /gb=CK089379
Sbi.14619
GABR1_37_H02.g1_A002 GA- or brassinolide-treated seedlings Sorghum bicolor cDNA clone GABR1_37_H02_A002 5', mRNA sequence /clone=GABR1_37_H02_A002 /clone_end=5' /gb=CX618130 /gi=57816917
Vvi.3593
WIN074.C21_M06 Cab Sauv pericarp normalized (WIN07) Vitis vinifera cDNA clone WIN074_M06 3', mRNA sequence /clone=WIN074_M06 /clone_end=3' /gb=EC959494

Domain Architecture

G2-like G2-like evm.TU.supercontig_27.191
DomainStartEndBit scoreE-value
Myb_DNA-binding217247.16.9e-11
G2-like247272.22.7e-21

Sequences