Plant Transcription factor database - CTBE
version: 3.0

Gene model: evm.TU.supercontig_1.210

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_1.210
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

475994 Score: 1

Arabidopsis thaliana

AT1G68670.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g22020.1 Score: 1

Populus trichocarpa

419693 Score: 1

Sorghum bicolor

5008445 Score: 1

Selaginella moellendorffii

66160 Score: 1

Vitis vinifera

GSVIVP00030296001 Score: 1

Zea mays

GRMZM2G016370_P01 Score: 1
GRMZM2G024361_P01 Score: 1
GRMZM2G159119_P01 Score: 0.958
GRMZM2G171025_P01 Score: 0.958

Expression data

Expressed Sequence Tags

At.25159
Arabidopsis thaliana myb family transcription factor (AT1G25550) mRNA, complete cds /cds=p(211,1245) /gb=NM_102366
At.27154
Arabidopsis thaliana myb family transcription factor (AT1G68670) mRNA, complete cds /cds=p(316,1380) /gb=NM_105539
Hv.11221
RUS75A02w HF Hordeum vulgare subsp. vulgare cDNA clone HF19D18, mRNA sequence /clone=HF19D18 /gb=FD524331
Vvi.24101
sT7aVVM002B15064 VVM Vitis vinifera cDNA clone VVM002B15064 5' similar to emb_CAO42100.1 unnamed protein product [Vitis vinifera]. Expect = 2e-128, mRNA sequence /clone=VVM002B15064 /clone_end=5' /gb=FC061778

Domain Architecture

G2-like G2-like evm.TU.supercontig_1.210
DomainStartEndBit scoreE-value
Myb_DNA-binding20325438.92e-08
G2-like20625472.81.8e-21

Sequences