Plant Transcription factor database - CTBE
version: 3.0

Gene model: OsIBCD021950

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD021950
Description
Chr06_4665,3591,,,1,3591,
Family
G2-like
3D structure (top 5)
2BW3 1IRZ
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.11993
Arabidopsis thaliana myb family transcription factor (AT3G13040) mRNA, complete cds /cds=p(259,1608) /gb=NM_112141
Hv.17217
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf60o08, mRNA sequence /gb=AK250014
Hv.9076
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf91j11, mRNA sequence /gb=AK250795
Mtr.12360
AC2769 NOLLY Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=DY617082
Os.52219
Oryza sativa Japonica Group cDNA clone:J013037C19, full insert sequence /cds=p(203,1606) /gb=AK065704
Os.5279
Oryza sativa Japonica Group cDNA clone:J013127L15, full insert sequence /cds=p(276,1715) /gb=AK067950
Os.53611
Oryza sativa Japonica Group cDNA clone:J033048H06, full insert sequence /cds=p(183,2156) /gb=AK073579

Domain Architecture

Myb_DNA-binding PF00249 OsIBCD021950
DomainStartEndBit scoreE-value
Myb_DNA-binding27132244.14.8e-10
G2-like27432272.81.8e-21
zf-C2HC_plant47852747.54.7e-11
DUF659721871148.61.8e-41

Sequences