Plant Transcription factor database - CTBE
version: 3.0

Gene model: OsIBCD021738

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD021738
Description
Chr06_4360,1995,,,1,1995,
Family
G2-like
3D structure (top 5)
1IRZ 2I1A
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

Os.53136
Oryza sativa (japonica cultivar-group) Os06g0670300 (Os06g0670300) mRNA, complete cds /cds=p(222,992) /gb=NM_001064863
Os.6588
Oryza sativa Japonica Group cDNA clone:002-182-E10, full insert sequence /cds=p(173,2122) /gb=AK119906
Os.78663
Oryza sativa (japonica cultivar-group) Os04g0243500 (Os04g0243500) mRNA, complete cds /cds=p(1,5124) /gb=NM_001058835
Os.79060
Oryza sativa (japonica cultivar-group) Os03g0166500 (Os03g0166500) mRNA, complete cds /cds=p(1,3654) /gb=NM_001055610
Os.79581
Oryza sativa (japonica cultivar-group) Os11g0677100 (Os11g0677100) mRNA, complete cds /cds=p(1,4338) /gb=NM_001074982
Os.80863
Oryza sativa (japonica cultivar-group) Os04g0399500 (Os04g0399500) mRNA, complete cds /cds=p(1,909) /gb=NM_001059214
Os.87885
Oryza sativa Japonica Group cDNA clone:J033136J06, full insert sequence /cds=p(3611,4726) /gb=AK122141

Domain Architecture

Myb_DNA-binding PF00249 OsIBCD021738
DomainStartEndBit scoreE-value
Myb_DNA-binding197034.93e-07
G2-like227069.22.2e-20
Retrotrans_gag30539962.31.7e-15
RVP_2498614-19.43.4e-05

Sequences