Plant Transcription factor database - CTBE
version: 3.0

Gene model: OsIBCD021702

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD021702
Description
Chr06_4304,1143,,,1,1143,
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.22199
Arabidopsis thaliana putative protein (At4g13640) mRNA, complete cds /cds=p(634,1083) /gb=AY081310
At.26588
Arabidopsis thaliana myb family transcription factor (AT3G24120) mRNA, complete cds /cds=p(168,1064) /gb=NM_202627
At.28330
Arabidopsis thaliana myb family transcription factor (AT3G12730) mRNA, complete cds /cds=p(259,966) /gb=NM_112109
Hv.30926
HX14D10r HX Hordeum vulgare subsp. vulgare cDNA clone HX14D10 5-PRIME, mRNA sequence /clone=HX14D10 /clone_end=5' /gb=CA032790
Mtr.19692
Medicago truncatula clone MTYF5_F6_F7_F81G-N-14 unknown mRNA /cds=p(177,1121) /gb=BT051559
Mtr.22841
Medicago truncatula clone MTYFD_FE_FF_FG1G-O-4 unknown mRNA /cds=m(89,1126) /gb=BT052638
Os.24699
Oryza sativa Japonica Group cDNA clone:001-028-A10, full insert sequence /cds=p(432,1298) /gb=AK059448
Os.50003
Oryza sativa Japonica Group cDNA clone:002-117-C12, full insert sequence /gb=AK119588
Os.51525
Oryza sativa Japonica Group cDNA clone:J023074M06, full insert sequence /gb=AK100282
Os.52524
Oryza sativa Japonica Group cDNA clone:J013112H14, full insert sequence /gb=AK067645
Os.79800
Oryza sativa (japonica cultivar-group) Os02g0174000 (Os02g0174000) mRNA, complete cds /cds=p(1,1152) /gb=NM_001052580
Ppa.20051
CAYY4734.fwd CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens subsp. patens cDNA clone CAYY4734 5', mRNA sequence /clone=CAYY4734 /clone_end=5' /gb=FC366443
Ppa.8175
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_175642) mRNA, complete cds /cds=p(1,852) /gb=XM_001754399
Pth.1872
Populus trichocarpa clone WS01214_H04 unknown mRNA /cds=p(155,1084) /gb=EF146817
Sbi.8412
RHOH1_19_A05.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_19_A05_A002 5', mRNA sequence /clone=RHOH1_19_A05_A002 /clone_end=5' /gb=CN126830 /gi=45952342
Sbi.8915
GABR1_14_D04.g1_A002 GA- or brassinolide-treated seedlings Sorghum bicolor cDNA clone GABR1_14_D04_A002 5', mRNA sequence /clone=GABR1_14_D04_A002 /clone_end=5' /gb=CX614526 /gi=57813270
Vvi.19363
VVI009B10_584200 CabSau Flower Stage 12 (FLOu0012) Vitis vinifera cDNA clone VVI009B10 5, mRNA sequence /clone=VVI009B10 /clone_end=5' /gb=DT017180

Domain Architecture

Myb_DNA-binding PF00249 OsIBCD021702
DomainStartEndBit scoreE-value
Myb_DNA-binding5810942.71.3e-09
G2-like61109723.2e-21

Sequences