Plant Transcription factor database - CTBE
version: 3.0

Gene model: OsIBCD012075

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD012075
Description
Chr03_5502,1047,,,1,1047,
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

Hv.19678
UCRHV18_05dh02_b1 Drought-stressed Dicktoo barley epidermis cDNA library Hordeum vulgare subsp. vulgare cDNA clone UCRHV18_05dh02, mRNA sequence /clone=UCRHV18_05dh02 /gb=CD663580
Hv.5292
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf100k19, mRNA sequence /gb=AK250938
Os.10333
Oryza sativa Japonica Group cDNA clone:J023048M12, full insert sequence /cds=p(114,1181) /gb=AK070421
Os.25453
Oryza sativa Japonica Group cDNA clone:001-200-C11, full insert sequence /cds=p(141,1187) /gb=AK105625
Pba.138
WS01230.BR_K12 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01230_K12 5', mRNA sequence /clone=WS01230_K12 /clone_end=5' /gb=DT474056
Pth.138
Populus trichocarpa clone WS0123_L02 unknown mRNA /cds=p(142,807) /gb=EF147597
Sbi.889
WOUND1_63_A02.b1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_63_A02_A002 3', mRNA sequence /clone=WOUND1_63_A02_A002 /clone_end=3' /gb=CN149466 /gi=45991182
Vvi.15531
WIN026.TB24.1_C08 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA clone WIN026_C08 3', mRNA sequence /clone=WIN026_C08 /clone_end=3' /gb=EC924639
Vvi.19728
CSECS173G04_POSu0038 CabSau Berry Postveraison Stage 38 (POSu0038) Vitis vinifera cDNA clone CSECS173G04 3', mRNA sequence /clone=CSECS173G04 /clone_end=3' /gb=DV939966
Vvi.6387
WIN027.TB24.1_K06 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA clone WIN027_K06 3', mRNA sequence /clone=WIN027_K06 /clone_end=3' /gb=EC925069

Domain Architecture

Myb_DNA-binding PF00249 OsIBCD012075
DomainStartEndBit scoreE-value
Myb_DNA-binding22627736.87.6e-08
G2-like22927773.61.1e-21

Sequences