Plant Transcription factor database - CTBE
version: 3.0

Gene model: OsIBCD008377

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD008377
Description
Chr02_5688,2259,,,1,2259,
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.26183
Arabidopsis thaliana myb family transcription factor (AT5G29000) mRNA, complete cds /cds=p(47,1288) /gb=NM_122784
At.4525
Arabidopsis thaliana PHR1 (PHOSPHATE STARVATION RESPONSE 1); transcription factor (PHR1) mRNA, complete cds /cds=p(156,1385) /gb=NM_119003
Hv.17078
RUS21B06w HA Hordeum vulgare subsp. vulgare cDNA clone HA25E04, mRNA sequence /clone=HA25E04 /gb=FD520928
Os.52320
Oryza sativa Japonica Group cDNA clone:J013064K05, full insert sequence /gb=AK066382
Os.58147
Oryza sativa (japonica cultivar-group) Os02g0814500 (Os02g0814500) mRNA, complete cds /cds=p(1,1056) /gb=NM_001055028
Vvi.12508
WIN022.C21_K17 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA clone WIN022_K17 3', mRNA sequence /clone=WIN022_K17 /clone_end=3' /gb=EC923787

Domain Architecture

Myb_DNA-binding PF00249 OsIBCD008377
DomainStartEndBit scoreE-value
Myb_DNA-binding59965046.59.7e-11
G2-like60265070.59.3e-21

Sequences