Plant Transcription factor database - CTBE
version: 3.0

Gene model: OsIBCD005187

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD005187
Description
Chr02_706,1938,,,1,1938,
Family
G2-like
3D structure (top 5)
1T47 2R5V 1CJX 1SP8 1SQD
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.48158
Arabidopsis thaliana PDS1 (PHYTOENE DESATURATION 1) (PDS1) mRNA, complete cds /cds=p(3,1424) /gb=NM_100536
Cre.3284
Chlamydomonas reinhardtii 4-hydroxyphenylpyruvate dioxygenase (HPD2) mRNA, complete cds /cds=p(125,1423) /gb=XM_001694671
Cre.6586
Chlamydomonas reinhardtii 4-hydroxyphenylpyruvate dioxygenase (HPD1) mRNA, complete cds /cds=p(1,1119) /gb=XM_001694670
Hv.20953
Hordeum vulgare mRNA for 4-hydroxyphenylpyruvate dioxygenase /cds=p(9,1313) /gb=AJ000693
Mtr.10792
Medicago truncatula 4-hydroxyphenylpyruvate dioxygenase (HPD) mRNA, complete cds /cds=p(157,1470) /gb=AY957391
Os.11995
Oryza sativa Japonica Group cDNA clone:001-007-D10, full insert sequence /gb=AK058890
Os.55501
CT859396 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa (indica cultivar-group) cDNA clone OSIGCRA117D12, mRNA sequence /clone=OSIGCRA117D12 /gb=CT859396
Ppa.10751
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_204526) mRNA, complete cds /cds=p(383,1684) /gb=XM_001756034
Ppa.8928
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_178418) mRNA, complete cds /cds=p(580,1878) /gb=XM_001757888
Vvi.837
WIN0821.C21_L09 Cab Sauv seed normalized (WIN08) Vitis vinifera cDNA clone WIN0821_L09 3', mRNA sequence /clone=WIN0821_L09 /clone_end=3' /gb=EC966682

Domain Architecture

Myb_DNA-binding PF00249 OsIBCD005187
DomainStartEndBit scoreE-value
Myb_DNA-binding257632.51.5e-06
G2-like287658.73.2e-17
Glyoxalase419576220.00093

Sequences