Plant Transcription factor database - CTBE
version: 3.0

Gene model: OsIBCD004666

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD004666
Description
Chr01_7078,951,,,1,951,
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.29219
Arabidopsis thaliana myb family transcription factor (AT5G59570) mRNA, complete cds /cds=p(160,1056) /gb=NM_125349
At.47951
Arabidopsis thaliana PCL1 (PHYTOCLOCK 1); DNA binding (PCL1) mRNA, complete cds /cds=p(159,1130) /gb=NM_001035746
Hv.20312
HV_CEb0011G20f Hordeum vulgare seedling green leaf EST library HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEb0011G20f, mRNA sequence /clone=HV_CEb0011G20f /gb=BE216742
Os.49746
Oryza sativa (japonica cultivar-group) induced protein MgI1 mRNA, complete cds /cds=p(218,934) /gb=AY581256
Sbi.15239
RHOH1_23_G11.g3_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_23_G11_A002 5', mRNA sequence /clone=RHOH1_23_G11_A002 /clone_end=5' /gb=CN127582 /gi=45953733

Domain Architecture

Myb_DNA-binding PF00249 OsIBCD004666
DomainStartEndBit scoreE-value
Myb_DNA-binding19824846.49.9e-11
G2-like20124895.23.2e-28

Sequences