Plant Transcription factor database - CTBE
version: 3.0

Gene model: LOC_Os09g23200.1

Identification

Species:
Oryza sativa subsp. japonica
Locus
LOC_Os09g23200
Gene model
LOC_Os09g23200.1
Description
KANADI1, putative
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Populus trichocarpa

755990 Score: 1
827763 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g33050.1 Score: 1
LOC_Os09g23200.1 Score: 1

Vitis vinifera

GSVIVP00026687001 Score: 1

Zea mays

GRMZM2G082264_P01 Score: 1

Expression data

Expressed Sequence Tags

At.25340
Arabidopsis thaliana KAN2 (KANADI 2); DNA binding / transcription factor (KAN2) mRNA, complete cds /cds=p(272,1438) /gb=NM_102957
At.6466
Arabidopsis thaliana KAN (KANADI); transcription factor (KAN) mRNA, complete cds /cds=p(333,1544) /gb=NM_121662
Os.24481
Oryza sativa (japonica cultivar-group) Os08g0160300 (Os08g0160300) mRNA, complete cds /cds=p(1,1038) /gb=NM_001067582
Os.55608
Oryza sativa Japonica Group cDNA clone:002-142-G11, full insert sequence /cds=p(225,1403) /gb=AK108408
Os.5597
Oryza sativa (japonica cultivar-group) Os09g0395300 (Os09g0395300) mRNA, complete cds /cds=p(1,1602) /gb=NM_001069632

Domain Architecture

G2-like G2-like LOC_Os09g23200.1
DomainStartEndBit scoreE-value
Myb_DNA-binding32637741.43.5e-09
G2-like32937760.96.8e-18

Sequences