Gene model: LOC_Os09g12750.1

Species: Oryza sativa subsp. japonica Locus LOC_Os09g12750 Gene model LOC_Os09g12750.1 Description Myb-like DNA-binding domain containing protein, putative, expressed Family G2-like 3D structure (top 5) 1IRZ
	PDB entry: 1IRZ

• Gramene
• Rice Genome Annotation Project - MSU

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

859493 Score: 1

Arabidopsis thaliana

AT3G24120.1 Score: 1
AT3G24120.2 Score: 0.986

Carica papaya

evm.TU.supercontig_27.192 Score: 1

Populus trichocarpa

174891 Score: 1

Zea mays

GRMZM2G064197_P03 Score: 1
GRMZM2G064197_P01 Score: 0.919

• MPSS data
• NCBI EST Profile Viewer (UniGene: At.22199)
• NCBI EST Profile Viewer (UniGene: At.26588)
• NCBI EST Profile Viewer (UniGene: At.50506)
• NCBI EST Profile Viewer (UniGene: Hv.12075)
• NCBI EST Profile Viewer (UniGene: Mtr.11460)
• NCBI EST Profile Viewer (UniGene: Mtr.15614)
• NCBI EST Profile Viewer (UniGene: Mtr.19692)
• NCBI EST Profile Viewer (UniGene: Mtr.22841)
• NCBI EST Profile Viewer (UniGene: Os.15464)
• NCBI EST Profile Viewer (UniGene: Os.50003)
• NCBI EST Profile Viewer (UniGene: Os.6430)
• NCBI EST Profile Viewer (UniGene: Os.79800)
• NCBI EST Profile Viewer (UniGene: Pba.3958)
• NCBI EST Profile Viewer (UniGene: Pth.1872)
• NCBI EST Profile Viewer (UniGene: Pth.3958)
• NCBI EST Profile Viewer (UniGene: Ptp.4282)
• NCBI EST Profile Viewer (UniGene: Vvi.19363)
• NCBI EST Profile Viewer (UniGene: Vvi.3202)

At.22199

Arabidopsis thaliana putative protein (At4g13640) mRNA, complete cds /cds=p(634,1083) /gb=AY081310

At.26588

Arabidopsis thaliana myb family transcription factor (AT3G24120) mRNA, complete cds /cds=p(168,1064) /gb=NM_202627

At.50506

Arabidopsis thaliana transcription factor (AT5G45580) mRNA, complete cds /cds=p(46,840) /gb=NM_123926

Hv.12075

HV_CEb0020G12f Hordeum vulgare seedling green leaf EST library HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEb0020G12f, mRNA sequence /clone=HV_CEb0020G12f /gb=BE558795

Mtr.11460

AC3671 NOLLY Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=DY617558

Mtr.15614

NF102H07EC1F1062 Elicited cell culture Medicago truncatula cDNA clone NF102H07EC 5', mRNA sequence /clone=NF102H07EC /clone_end=5' /gb=BF651193

Mtr.19692

Medicago truncatula clone MTYF5_F6_F7_F81G-N-14 unknown mRNA /cds=p(177,1121) /gb=BT051559

Mtr.22841

Medicago truncatula clone MTYFD_FE_FF_FG1G-O-4 unknown mRNA /cds=m(89,1126) /gb=BT052638

Os.15464

RECm0256 A normalized whole-life-cycle cDNA library of rice Oryza sativa (indica cultivar-group) cDNA clone BI027I04, BI075P20, BI106D17, BI125D14 5', mRNA sequence /clone=BI027I04,_BI075P20,_BI106D17,_BI125D14 /clone_end=5' /gb=CX099620

Os.50003

Oryza sativa Japonica Group cDNA clone:002-117-C12, full insert sequence /gb=AK119588

Os.6430

Oryza sativa Japonica Group cDNA clone:J023010K22, full insert sequence /gb=AK069336

Os.79800

Oryza sativa (japonica cultivar-group) Os02g0174000 (Os02g0174000) mRNA, complete cds /cds=p(1,1152) /gb=NM_001052580

Pba.3958

Q060C05 Populus flower cDNA library Populus trichocarpa cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU873815

Pth.1872

Populus trichocarpa clone WS01214_H04 unknown mRNA /cds=p(155,1084) /gb=EF146817

Pth.3958

Q060C05 Populus flower cDNA library Populus trichocarpa cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU873815

Ptp.4282

T063H04 Populus apical shoot cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU834640

Vvi.19363

VVI009B10_584200 CabSau Flower Stage 12 (FLOu0012) Vitis vinifera cDNA clone VVI009B10 5, mRNA sequence /clone=VVI009B10 /clone_end=5' /gb=DT017180

Vvi.3202

WIN1149.C21_O01 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1149_O01 3', mRNA sequence /clone=WIN1149_O01 /clone_end=3' /gb=EC993936

protein sequence
transcript sequence