version: 3.0
Gene model: LOC_Os08g25799.1
Identification
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Genome Databases
Orthologs and co-orthologs (in-paralogs)
Look for sequence homologs using SIMAP@MIPS
SIMAPOrtholog identification by INPARANOID
Populus trichocarpa
785023 Score: 1Vitis vinifera
GSVIVP00011845001 Score: 1Zea mays
GRMZM2G113742_P01 Score: 1Expression data
- MPSS data
- NCBI EST Profile Viewer (UniGene: At.26588)
- NCBI EST Profile Viewer (UniGene: Hv.12075)
- NCBI EST Profile Viewer (UniGene: Mtr.11460)
- NCBI EST Profile Viewer (UniGene: Mtr.15614)
- NCBI EST Profile Viewer (UniGene: Mtr.19692)
- NCBI EST Profile Viewer (UniGene: Mtr.22841)
- NCBI EST Profile Viewer (UniGene: Os.15464)
- NCBI EST Profile Viewer (UniGene: Os.24699)
- NCBI EST Profile Viewer (UniGene: Os.50003)
- NCBI EST Profile Viewer (UniGene: Os.52524)
- NCBI EST Profile Viewer (UniGene: Os.6430)
- NCBI EST Profile Viewer (UniGene: Os.79800)
- NCBI EST Profile Viewer (UniGene: Pba.3958)
- NCBI EST Profile Viewer (UniGene: Ppa.20051)
- NCBI EST Profile Viewer (UniGene: Ppa.8175)
- NCBI EST Profile Viewer (UniGene: Pth.1872)
- NCBI EST Profile Viewer (UniGene: Pth.3958)
- NCBI EST Profile Viewer (UniGene: Ptp.4282)
Expressed Sequence Tags
- At.26588
- Arabidopsis thaliana myb family transcription factor (AT3G24120) mRNA, complete cds /cds=p(168,1064) /gb=NM_202627
- Hv.12075
- HV_CEb0020G12f Hordeum vulgare seedling green leaf EST library HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEb0020G12f, mRNA sequence /clone=HV_CEb0020G12f /gb=BE558795
- Mtr.11460
- AC3671 NOLLY Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=DY617558
- Mtr.15614
- NF102H07EC1F1062 Elicited cell culture Medicago truncatula cDNA clone NF102H07EC 5', mRNA sequence /clone=NF102H07EC /clone_end=5' /gb=BF651193
- Mtr.19692
- Medicago truncatula clone MTYF5_F6_F7_F81G-N-14 unknown mRNA /cds=p(177,1121) /gb=BT051559
- Mtr.22841
- Medicago truncatula clone MTYFD_FE_FF_FG1G-O-4 unknown mRNA /cds=m(89,1126) /gb=BT052638
- Os.15464
- RECm0256 A normalized whole-life-cycle cDNA library of rice Oryza sativa (indica cultivar-group) cDNA clone BI027I04, BI075P20, BI106D17, BI125D14 5', mRNA sequence /clone=BI027I04,_BI075P20,_BI106D17,_BI125D14 /clone_end=5' /gb=CX099620
- Os.24699
- Oryza sativa Japonica Group cDNA clone:001-028-A10, full insert sequence /cds=p(432,1298) /gb=AK059448
- Os.50003
- Oryza sativa Japonica Group cDNA clone:002-117-C12, full insert sequence /gb=AK119588
- Os.52524
- Oryza sativa Japonica Group cDNA clone:J013112H14, full insert sequence /gb=AK067645
- Os.6430
- Oryza sativa Japonica Group cDNA clone:J023010K22, full insert sequence /gb=AK069336
- Os.79800
- Oryza sativa (japonica cultivar-group) Os02g0174000 (Os02g0174000) mRNA, complete cds /cds=p(1,1152) /gb=NM_001052580
- Pba.3958
- Q060C05 Populus flower cDNA library Populus trichocarpa cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU873815
- Ppa.20051
- CAYY4734.fwd CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens subsp. patens cDNA clone CAYY4734 5', mRNA sequence /clone=CAYY4734 /clone_end=5' /gb=FC366443
- Ppa.8175
- Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_175642) mRNA, complete cds /cds=p(1,852) /gb=XM_001754399
- Pth.1872
- Populus trichocarpa clone WS01214_H04 unknown mRNA /cds=p(155,1084) /gb=EF146817
- Pth.3958
- Q060C05 Populus flower cDNA library Populus trichocarpa cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU873815
- Ptp.4282
- T063H04 Populus apical shoot cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU834640