Plant Transcription factor database - CTBE
version: 3.0

Gene model: LOC_Os08g06370.1

Identification

Species:
Oryza sativa subsp. japonica
Locus
LOC_Os08g06370
Gene model
LOC_Os08g06370.1
Description
MYB family transcription factor, putative, expressed
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

473414 Score: 1

Arabidopsis thaliana

AT1G32240.1 Score: 1

Carica papaya

evm.TU.supercontig_208.12 Score: 1

Populus trichocarpa

554056 Score: 1
590054 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g46940.1 Score: 1
LOC_Os08g06370.1 Score: 1

Sorghum bicolor

4986383 Score: 1

Zea mays

GRMZM2G123308_P01 Score: 1
GRMZM2G073897_P01 Score: 0.936
GRMZM2G123308_P02 Score: 0.936

Expression data

Expressed Sequence Tags

Os.24481
Oryza sativa (japonica cultivar-group) Os08g0160300 (Os08g0160300) mRNA, complete cds /cds=p(1,1038) /gb=NM_001067582
Vvi.12238
WIN0560.C21_I20 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0560_I20 3', mRNA sequence /clone=WIN0560_I20 /clone_end=3' /gb=EC954053

Domain Architecture

G2-like G2-like LOC_Os08g06370.1
DomainStartEndBit scoreE-value
Myb_DNA-binding16121241.53.3e-09
G2-like16421264.27.1e-19

Sequences