Plant Transcription factor database - CTBE
version: 3.0

Gene model: LOC_Os07g02800.3

Identification

Species:
Oryza sativa subsp. japonica
Locus
LOC_Os07g02800
Gene model
LOC_Os07g02800.3
Description
MYB family transcription factor, putative, expressed
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Sorghum bicolor

5050489 Score: 1

Oryza sativa subsp. japonica

LOC_Os07g02800.2 Score: 1
LOC_Os07g02800.3 Score: 0.966

Zea mays

GRMZM2G119940_P01 Score: 1
GRMZM2G173882_P01 Score: 1

Oryza sativa subsp. japonica

LOC_Os07g02800.2 Score: 1
LOC_Os07g02800.3 Score: 0.968

Expression data

Expressed Sequence Tags

Hv.19678
UCRHV18_05dh02_b1 Drought-stressed Dicktoo barley epidermis cDNA library Hordeum vulgare subsp. vulgare cDNA clone UCRHV18_05dh02, mRNA sequence /clone=UCRHV18_05dh02 /gb=CD663580
Hv.5292
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf100k19, mRNA sequence /gb=AK250938
Os.10333
Oryza sativa Japonica Group cDNA clone:J023048M12, full insert sequence /cds=p(114,1181) /gb=AK070421
Sbi.889
WOUND1_63_A02.b1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_63_A02_A002 3', mRNA sequence /clone=WOUND1_63_A02_A002 /clone_end=3' /gb=CN149466 /gi=45991182

Domain Architecture

G2-like G2-like LOC_Os07g02800.3
DomainStartEndBit scoreE-value
Myb_DNA-binding23028132.41.9e-06
G2-like23328158.24.5e-17

Sequences