Plant Transcription factor database - CTBE
version: 3.0

Gene model: LOC_Os05g34110.1

Identification

Species:
Oryza sativa subsp. japonica
Locus
LOC_Os05g34110
Gene model
LOC_Os05g34110.1
Description
homeodomain-related, putative, expressed
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

897268 Score: 1

Arabidopsis thaliana

AT3G10760.1 Score: 1

Carica papaya

evm.TU.supercontig_92.70 Score: 1

Populus trichocarpa

418537 Score: 1

Sorghum bicolor

5009650 Score: 1

Vitis vinifera

GSVIVP00023291001 Score: 1

Zea mays

GRMZM2G012637_P01 Score: 1
GRMZM2G151823_P01 Score: 1
GRMZM2G170324_P01 Score: 1

Expression data

Expressed Sequence Tags

At.27776
Arabidopsis thaliana myb family transcription factor (AT2G40970) mRNA, complete cds /cds=p(178,924) /gb=NM_129662
Os.21034
Oryza sativa (japonica cultivar-group) Os05g0412000 (Os05g0412000) mRNA, complete cds /cds=p(1,996) /gb=NM_001062074

Domain Architecture

G2-like G2-like LOC_Os05g34110.1
DomainStartEndBit scoreE-value
Myb_DNA-binding11216244.15.4e-10
G2-like11516298.24.2e-29

Sequences