Plant Transcription factor database - CTBE
version: 3.0

Gene model: LOC_Os03g45194.1

Identification

Species:
Oryza sativa subsp. japonica
Locus
LOC_Os03g45194
Gene model
LOC_Os03g45194.1
Description
oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed
Family
G2-like
3D structure (top 5)
2Q2V 1OAA 1XU9 2ET6 2YUT
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Sorghum bicolor

5048453 Score: 1

Expression data

Expressed Sequence Tags

At.33057
Arabidopsis thaliana short-chain dehydrogenase/reductase (SDR) family protein (AT5G04900) mRNA, complete cds /cds=p(53,1099) /gb=NM_120572
Hv.13895
HDP14C11w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP14C11, mRNA sequence /clone=HDP14C11 /gb=EX575870
Mtr.13639
EST668890 MTUS Medicago truncatula cDNA clone MTUS-4F10, mRNA sequence /clone=MTUS-4F10 /gb=CF068169
Os.58369
Oryza sativa (japonica cultivar-group) Os03g0654600 (Os03g0654600) mRNA, complete cds /cds=p(1,1620) /gb=NM_001057333
Pba.418
WS01223.B21_I19 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01223_I19 3', mRNA sequence /clone=WS01223_I19 /clone_end=3' /gb=CV236281
Ppa.11051
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_152699) mRNA, complete cds /cds=p(1,870) /gb=XM_001783637
Pth.418
WS01223.B21_I19 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01223_I19 3', mRNA sequence /clone=WS01223_I19 /clone_end=3' /gb=CV236281
Vvi.22411
WIN0525.C21_A20 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0525_A20 3', mRNA sequence /clone=WIN0525_A20 /clone_end=3' /gb=EC942199

Domain Architecture

G2-like G2-like LOC_Os03g45194.1
DomainStartEndBit scoreE-value
adh_short7426439.61.2e-08
Myb_DNA-binding38744125.50.00022
G2-like39044146.12e-13

Sequences