Plant Transcription factor database - CTBE
version: 3.0

Gene model: LOC_Os02g22020.1

Identification

Species:
Oryza sativa subsp. japonica
Locus
LOC_Os02g22020
Gene model
LOC_Os02g22020.1
Description
MYB family transcription factor, putative, expressed
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

475994 Score: 1

Arabidopsis thaliana

AT1G25550.1 Score: 1

Carica papaya

evm.TU.supercontig_1.210 Score: 1

Populus trichocarpa

225637 Score: 1
419693 Score: 1

Sorghum bicolor

5008445 Score: 1

Selaginella moellendorffii

66160 Score: 1

Vitis vinifera

GSVIVP00030296001 Score: 1

Zea mays

GRMZM2G159119_P01 Score: 1
GRMZM2G171025_P01 Score: 1

Expression data

Expressed Sequence Tags

Hv.11221
RUS75A02w HF Hordeum vulgare subsp. vulgare cDNA clone HF19D18, mRNA sequence /clone=HF19D18 /gb=FD524331
Os.51945
Oryza sativa Japonica Group cDNA clone:J033066M05, full insert sequence /cds=p(269,1507) /gb=AK101809
Sbi.1926
ANR1_6_H07.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone ANR1_6_H07_A002 5', mRNA sequence /clone=ANR1_6_H07_A002 /clone_end=5' /gb=CX607135 /gi=57805357

Domain Architecture

G2-like G2-like LOC_Os02g22020.1
DomainStartEndBit scoreE-value
Myb_DNA-binding23728830.28.6e-06
G2-like24028872.72e-21

Sequences