Plant Transcription factor database - CTBE
version: 3.0

Gene model: LOC_Os01g08160.1

Identification

Species:
Oryza sativa subsp. japonica
Locus
LOC_Os01g08160
Gene model
LOC_Os01g08160.1
Description
MYB family transcription factor, putative, expressed
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

904629 Score: 1

Arabidopsis thaliana

AT2G03500.1 Score: 1

Carica papaya

evm.TU.supercontig_127.52 Score: 1

Physcomitrella patens

160637 Score: 1

Populus trichocarpa

561130 Score: 1

Sorghum bicolor

4973318 Score: 1

Selaginella moellendorffii

402040 Score: 1

Vitis vinifera

GSVIVP00016820001 Score: 1

Expression data

Expressed Sequence Tags

Hv.15302
HV_CEa0003B14f Hordeum vulgare seedling green leaf EST library HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEa0003B14f, mRNA sequence /clone=HV_CEa0003B14f /gb=BF262108
Os.29819
Oryza sativa Japonica Group cDNA clone:002-147-G07, full insert sequence /gb=AK109808

Domain Architecture

G2-like G2-like LOC_Os01g08160.1
DomainStartEndBit scoreE-value
Myb_DNA-binding26831934.63.9e-07
G2-like27131972.22.7e-21

Sequences