Plant Transcription factor database - CTBE
version: 3.0

Gene model: GSVIVP00038751001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00038751001
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

356449 Score: 1

Arabidopsis thaliana

AT5G45580.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g47190.1 Score: 1

Ostreococcus tauri

35984 Score: 1

Populus trichocarpa

554102 Score: 1

Sorghum bicolor

5055745 Score: 1

Zea mays

GRMZM2G125704_P02 Score: 1
GRMZM2G151987_P02 Score: 1

Expression data

Expressed Sequence Tags

At.52449
Arabidopsis thaliana unknown protein (AT1G69580) mRNA, complete cds /cds=p(185,1198) /gb=NM_001084329
Mtr.19692
Medicago truncatula clone MTYF5_F6_F7_F81G-N-14 unknown mRNA /cds=p(177,1121) /gb=BT051559
Mtr.22841
Medicago truncatula clone MTYFD_FE_FF_FG1G-O-4 unknown mRNA /cds=m(89,1126) /gb=BT052638
Os.50003
Oryza sativa Japonica Group cDNA clone:002-117-C12, full insert sequence /gb=AK119588
Os.51525
Oryza sativa Japonica Group cDNA clone:J023074M06, full insert sequence /gb=AK100282
Os.52524
Oryza sativa Japonica Group cDNA clone:J013112H14, full insert sequence /gb=AK067645
Os.79800
Oryza sativa (japonica cultivar-group) Os02g0174000 (Os02g0174000) mRNA, complete cds /cds=p(1,1152) /gb=NM_001052580
Ppa.20051
CAYY4734.fwd CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens subsp. patens cDNA clone CAYY4734 5', mRNA sequence /clone=CAYY4734 /clone_end=5' /gb=FC366443
Pth.1872
Populus trichocarpa clone WS01214_H04 unknown mRNA /cds=p(155,1084) /gb=EF146817
Sbi.8412
RHOH1_19_A05.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_19_A05_A002 5', mRNA sequence /clone=RHOH1_19_A05_A002 /clone_end=5' /gb=CN126830 /gi=45952342
Vvi.19118
WIN0549.C21_H07 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0549_H07 3', mRNA sequence /clone=WIN0549_H07 /clone_end=3' /gb=EC950374
Vvi.19363
VVI009B10_584200 CabSau Flower Stage 12 (FLOu0012) Vitis vinifera cDNA clone VVI009B10 5, mRNA sequence /clone=VVI009B10 /clone_end=5' /gb=DT017180

Domain Architecture

G2-like G2-like GSVIVP00038751001
DomainStartEndBit scoreE-value
Myb_DNA-binding186944.34.8e-10
G2-like216965.72.5e-19

Sequences