Plant Transcription factor database - CTBE
version: 3.0

Gene model: GSVIVP00031697001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00031697001
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

319110 Score: 1

Arabidopsis thaliana

AT3G24120.1 Score: 1
AT3G24120.2 Score: 0.974

Carica papaya

evm.TU.supercontig_817.1 Score: 1

Micromonas pusilla CCMP1545

61323 Score: 1

Physcomitrella patens

175642 Score: 1

Populus trichocarpa

174891 Score: 1

Selaginella moellendorffii

149357 Score: 1

Expression data

Expressed Sequence Tags

At.22199
Arabidopsis thaliana putative protein (At4g13640) mRNA, complete cds /cds=p(634,1083) /gb=AY081310
At.23550
Arabidopsis thaliana APL (ALTERED PHLOEM DEVELOPMENT); transcription factor (APL) mRNA, complete cds /cds=p(355,1236) /gb=NM_106591
At.26588
Arabidopsis thaliana myb family transcription factor (AT3G24120) mRNA, complete cds /cds=p(168,1064) /gb=NM_202627
At.40915
Arabidopsis thaliana myb family transcription factor (AT3G04030) mRNA, complete cds /cds=p(124,1308) /gb=NM_001125095
Mtr.19692
Medicago truncatula clone MTYF5_F6_F7_F81G-N-14 unknown mRNA /cds=p(177,1121) /gb=BT051559
Mtr.22841
Medicago truncatula clone MTYFD_FE_FF_FG1G-O-4 unknown mRNA /cds=m(89,1126) /gb=BT052638
Os.15464
RECm0256 A normalized whole-life-cycle cDNA library of rice Oryza sativa (indica cultivar-group) cDNA clone BI027I04, BI075P20, BI106D17, BI125D14 5', mRNA sequence /clone=BI027I04,_BI075P20,_BI106D17,_BI125D14 /clone_end=5' /gb=CX099620
Os.50003
Oryza sativa Japonica Group cDNA clone:002-117-C12, full insert sequence /gb=AK119588
Os.51525
Oryza sativa Japonica Group cDNA clone:J023074M06, full insert sequence /gb=AK100282
Os.79800
Oryza sativa (japonica cultivar-group) Os02g0174000 (Os02g0174000) mRNA, complete cds /cds=p(1,1152) /gb=NM_001052580
Pba.1872
F009P52.3pR Populus flower cDNA library Populus trichocarpa cDNA clone F009P52 3', mRNA sequence /clone=F009P52 /clone_end=3' /gb=CK090502
Pba.338
WS02520.B21_D16 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02520_D16 3', mRNA sequence /clone=WS02520_D16 /clone_end=3' /gb=DT482586
Ppa.20051
CAYY4734.fwd CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens subsp. patens cDNA clone CAYY4734 5', mRNA sequence /clone=CAYY4734 /clone_end=5' /gb=FC366443
Pth.16392
WS0197.B21_G16 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS0197_G16 3', mRNA sequence /clone=WS0197_G16 /clone_end=3' /gb=CV232380
Pth.1872
Populus trichocarpa clone WS01214_H04 unknown mRNA /cds=p(155,1084) /gb=EF146817
Ptp.4282
T063H04 Populus apical shoot cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU834640
Sbi.8915
GABR1_14_D04.g1_A002 GA- or brassinolide-treated seedlings Sorghum bicolor cDNA clone GABR1_14_D04_A002 5', mRNA sequence /clone=GABR1_14_D04_A002 /clone_end=5' /gb=CX614526 /gi=57813270
Vvi.19363
VVI009B10_584200 CabSau Flower Stage 12 (FLOu0012) Vitis vinifera cDNA clone VVI009B10 5, mRNA sequence /clone=VVI009B10 /clone_end=5' /gb=DT017180
Vvi.3202
WIN1149.C21_O01 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1149_O01 3', mRNA sequence /clone=WIN1149_O01 /clone_end=3' /gb=EC993936

Domain Architecture

G2-like G2-like GSVIVP00031697001
DomainStartEndBit scoreE-value
Myb_DNA-binding439449.11.7e-11
G2-like469472.13e-21

Sequences