Plant Transcription factor database - CTBE
version: 3.0

Gene model: GRMZM2G173882_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G173882_P01
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_62.51 Score: 1

Zea mays

GRMZM2G119940_P01 Score: 1
GRMZM2G173882_P01 Score: 1

Zea mays

GRMZM2G119940_P01 Score: 1
GRMZM2G173882_P01 Score: 1

Oryza sativa subsp. japonica

LOC_Os07g02800.2 Score: 1
LOC_Os07g02800.3 Score: 0.968

Populus trichocarpa

827942 Score: 1

Zea mays

GRMZM2G119940_P01 Score: 1
GRMZM2G173882_P01 Score: 1

Sorghum bicolor

5050489 Score: 1

Zea mays

GRMZM2G119940_P01 Score: 1
GRMZM2G173882_P01 Score: 1

Expression data

Expressed Sequence Tags

Hv.19678
UCRHV18_05dh02_b1 Drought-stressed Dicktoo barley epidermis cDNA library Hordeum vulgare subsp. vulgare cDNA clone UCRHV18_05dh02, mRNA sequence /clone=UCRHV18_05dh02 /gb=CD663580
Hv.5292
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf100k19, mRNA sequence /gb=AK250938
Os.10333
Oryza sativa Japonica Group cDNA clone:J023048M12, full insert sequence /cds=p(114,1181) /gb=AK070421
Os.25453
Oryza sativa Japonica Group cDNA clone:001-200-C11, full insert sequence /cds=p(141,1187) /gb=AK105625
Sbi.889
WOUND1_63_A02.b1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_63_A02_A002 3', mRNA sequence /clone=WOUND1_63_A02_A002 /clone_end=3' /gb=CN149466 /gi=45991182
Vvi.15531
WIN026.TB24.1_C08 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA clone WIN026_C08 3', mRNA sequence /clone=WIN026_C08 /clone_end=3' /gb=EC924639
Vvi.19728
CSECS173G04_POSu0038 CabSau Berry Postveraison Stage 38 (POSu0038) Vitis vinifera cDNA clone CSECS173G04 3', mRNA sequence /clone=CSECS173G04 /clone_end=3' /gb=DV939966
Vvi.6387
WIN027.TB24.1_K06 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA clone WIN027_K06 3', mRNA sequence /clone=WIN027_K06 /clone_end=3' /gb=EC925069

Domain Architecture

Myb_DNA-binding PF00249 GRMZM2G173882_P01
DomainStartEndBit scoreE-value
Myb_DNA-binding22427537.16.9e-08
G2-like22727574.36.5e-22

Sequences