Plant Transcription factor database - CTBE
version: 3.0

Gene model: GRMZM2G113742_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G113742_P01
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_27.192 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g25799.1 Score: 1

Populus trichocarpa

785023 Score: 1

Vitis vinifera

GSVIVP00011845001 Score: 1

Expression data

Expressed Sequence Tags

At.22199
Arabidopsis thaliana putative protein (At4g13640) mRNA, complete cds /cds=p(634,1083) /gb=AY081310
At.26588
Arabidopsis thaliana myb family transcription factor (AT3G24120) mRNA, complete cds /cds=p(168,1064) /gb=NM_202627
At.50506
Arabidopsis thaliana transcription factor (AT5G45580) mRNA, complete cds /cds=p(46,840) /gb=NM_123926
Hv.12075
HV_CEb0020G12f Hordeum vulgare seedling green leaf EST library HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEb0020G12f, mRNA sequence /clone=HV_CEb0020G12f /gb=BE558795
Mtr.11460
AC3671 NOLLY Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=DY617558
Mtr.15614
NF102H07EC1F1062 Elicited cell culture Medicago truncatula cDNA clone NF102H07EC 5', mRNA sequence /clone=NF102H07EC /clone_end=5' /gb=BF651193
Mtr.19692
Medicago truncatula clone MTYF5_F6_F7_F81G-N-14 unknown mRNA /cds=p(177,1121) /gb=BT051559
Mtr.22841
Medicago truncatula clone MTYFD_FE_FF_FG1G-O-4 unknown mRNA /cds=m(89,1126) /gb=BT052638
Os.15464
RECm0256 A normalized whole-life-cycle cDNA library of rice Oryza sativa (indica cultivar-group) cDNA clone BI027I04, BI075P20, BI106D17, BI125D14 5', mRNA sequence /clone=BI027I04,_BI075P20,_BI106D17,_BI125D14 /clone_end=5' /gb=CX099620
Os.50003
Oryza sativa Japonica Group cDNA clone:002-117-C12, full insert sequence /gb=AK119588
Os.6430
Oryza sativa Japonica Group cDNA clone:J023010K22, full insert sequence /gb=AK069336
Os.79800
Oryza sativa (japonica cultivar-group) Os02g0174000 (Os02g0174000) mRNA, complete cds /cds=p(1,1152) /gb=NM_001052580
Pba.3958
Q060C05 Populus flower cDNA library Populus trichocarpa cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU873815
Ppa.20051
CAYY4734.fwd CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens subsp. patens cDNA clone CAYY4734 5', mRNA sequence /clone=CAYY4734 /clone_end=5' /gb=FC366443
Pth.1872
Populus trichocarpa clone WS01214_H04 unknown mRNA /cds=p(155,1084) /gb=EF146817
Pth.3958
Q060C05 Populus flower cDNA library Populus trichocarpa cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU873815
Ptp.4282
T063H04 Populus apical shoot cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU834640
Vvi.19363
VVI009B10_584200 CabSau Flower Stage 12 (FLOu0012) Vitis vinifera cDNA clone VVI009B10 5, mRNA sequence /clone=VVI009B10 /clone_end=5' /gb=DT017180
Vvi.3202
WIN1149.C21_O01 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1149_O01 3', mRNA sequence /clone=WIN1149_O01 /clone_end=3' /gb=EC993936

Domain Architecture

Myb_DNA-binding PF00249 GRMZM2G113742_P01
DomainStartEndBit scoreE-value
Myb_DNA-binding4910047.55.1e-11
G2-like52100685.1e-20

Sequences