Plant Transcription factor database - CTBE
version: 3.0

Gene model: GRMZM2G064197_P01

Identification

Species:
Zea mays
Gene model
GRMZM2G064197_P01
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

859493 Score: 1

Zea mays

GRMZM2G064197_P01 Score: 1
GRMZM2G064197_P03 Score: 0.977

Arabidopsis thaliana

AT3G24120.1 Score: 1
AT4G13640.1 Score: 1
AT4G13640.2 Score: 1
AT3G24120.2 Score: 0.986

Zea mays

GRMZM2G064197_P01 Score: 1
GRMZM2G064197_P03 Score: 1

Zea mays

GRMZM2G064197_P03 Score: 1
GRMZM2G064197_P01 Score: 0.919

Oryza sativa subsp. japonica

LOC_Os09g12750.1 Score: 1

Physcomitrella patens

21269 Score: 1

Zea mays

GRMZM2G064197_P03 Score: 1
GRMZM2G064197_P01 Score: 0.982

Populus trichocarpa

174891 Score: 1

Zea mays

GRMZM2G064197_P03 Score: 1
GRMZM2G064197_P01 Score: 0.977

Zea mays

GRMZM2G064197_P03 Score: 1
GRMZM2G064197_P01 Score: 0.962

Expression data

Expressed Sequence Tags

At.26588
Arabidopsis thaliana myb family transcription factor (AT3G24120) mRNA, complete cds /cds=p(168,1064) /gb=NM_202627
At.28330
Arabidopsis thaliana myb family transcription factor (AT3G12730) mRNA, complete cds /cds=p(259,966) /gb=NM_112109
Hv.12075
HV_CEb0020G12f Hordeum vulgare seedling green leaf EST library HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEb0020G12f, mRNA sequence /clone=HV_CEb0020G12f /gb=BE558795
Mtr.11460
AC3671 NOLLY Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=DY617558
Mtr.15614
NF102H07EC1F1062 Elicited cell culture Medicago truncatula cDNA clone NF102H07EC 5', mRNA sequence /clone=NF102H07EC /clone_end=5' /gb=BF651193
Mtr.19692
Medicago truncatula clone MTYF5_F6_F7_F81G-N-14 unknown mRNA /cds=p(177,1121) /gb=BT051559
Os.15464
RECm0256 A normalized whole-life-cycle cDNA library of rice Oryza sativa (indica cultivar-group) cDNA clone BI027I04, BI075P20, BI106D17, BI125D14 5', mRNA sequence /clone=BI027I04,_BI075P20,_BI106D17,_BI125D14 /clone_end=5' /gb=CX099620
Os.50003
Oryza sativa Japonica Group cDNA clone:002-117-C12, full insert sequence /gb=AK119588
Os.6430
Oryza sativa Japonica Group cDNA clone:J023010K22, full insert sequence /gb=AK069336
Os.79800
Oryza sativa (japonica cultivar-group) Os02g0174000 (Os02g0174000) mRNA, complete cds /cds=p(1,1152) /gb=NM_001052580
Pba.3958
Q060C05 Populus flower cDNA library Populus trichocarpa cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU873815
Ppa.8175
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_175642) mRNA, complete cds /cds=p(1,852) /gb=XM_001754399
Pth.1872
Populus trichocarpa clone WS01214_H04 unknown mRNA /cds=p(155,1084) /gb=EF146817
Pth.3958
Q060C05 Populus flower cDNA library Populus trichocarpa cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU873815
Ptp.4282
T063H04 Populus apical shoot cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU834640

Domain Architecture

Myb_DNA-binding PF00249 GRMZM2G064197_P01
DomainStartEndBit scoreE-value
Myb_DNA-binding399049.21.6e-11
G2-like429067.57.3e-20

Sequences