Plant Transcription factor database - CTBE
version: 3.0

Gene model: AT5G59570.1

Identification

Species:
Arabidopsis thaliana
Locus
AT5G59570
Gene model
AT5G59570.1
Description
myb family transcription factor
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

496092 Score: 1

Chlorella sp. NC64A

141785 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g74020.1 Score: 1

Sorghum bicolor

4168609 Score: 1

Expression data

Expressed Sequence Tags

At.29219
Arabidopsis thaliana myb family transcription factor (AT5G59570) mRNA, complete cds /cds=p(160,1056) /gb=NM_125349
At.47951
Arabidopsis thaliana PCL1 (PHYTOCLOCK 1); DNA binding (PCL1) mRNA, complete cds /cds=p(159,1130) /gb=NM_001035746
Os.49746
Oryza sativa (japonica cultivar-group) induced protein MgI1 mRNA, complete cds /cds=p(218,934) /gb=AY581256
Pba.5228
WS02531.B21_L06 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02531_L06 3', mRNA sequence /clone=WS02531_L06 /clone_end=3' /gb=DT486700
Pth.5228
WS02531.B21_L06 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02531_L06 3', mRNA sequence /clone=WS02531_L06 /clone_end=3' /gb=DT486700
Sbi.15239
RHOH1_23_G11.g3_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_23_G11_A002 5', mRNA sequence /clone=RHOH1_23_G11_A002 /clone_end=5' /gb=CN127582 /gi=45953733

Domain Architecture

Myb_DNA-binding PF00249 AT5G59570.1
DomainStartEndBit scoreE-value
Myb_DNA-binding14319343.57.3e-10
G2-like14619396.81.1e-28

Sequences