Plant Transcription factor database - CTBE
version: 3.0

Gene model: AT5G45580.1

Identification

Species:
Arabidopsis thaliana
Locus
AT5G45580
Gene model
AT5G45580.1
Description
transcription factor
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

356449 Score: 1

Populus trichocarpa

554102 Score: 1

Sorghum bicolor

5055745 Score: 1

Vitis vinifera

GSVIVP00038751001 Score: 1

Zea mays

GRMZM2G125704_P02 Score: 1
GRMZM2G151987_P02 Score: 1

Expression data

Expressed Sequence Tags

At.26588
Arabidopsis thaliana myb family transcription factor (AT3G24120) mRNA, complete cds /cds=p(168,1064) /gb=NM_202627
At.50506
Arabidopsis thaliana transcription factor (AT5G45580) mRNA, complete cds /cds=p(46,840) /gb=NM_123926
Hv.12075
HV_CEb0020G12f Hordeum vulgare seedling green leaf EST library HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEb0020G12f, mRNA sequence /clone=HV_CEb0020G12f /gb=BE558795
Os.15464
RECm0256 A normalized whole-life-cycle cDNA library of rice Oryza sativa (indica cultivar-group) cDNA clone BI027I04, BI075P20, BI106D17, BI125D14 5', mRNA sequence /clone=BI027I04,_BI075P20,_BI106D17,_BI125D14 /clone_end=5' /gb=CX099620
Os.50003
Oryza sativa Japonica Group cDNA clone:002-117-C12, full insert sequence /gb=AK119588
Os.79800
Oryza sativa (japonica cultivar-group) Os02g0174000 (Os02g0174000) mRNA, complete cds /cds=p(1,1152) /gb=NM_001052580
Ppa.20051
CAYY4734.fwd CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens subsp. patens cDNA clone CAYY4734 5', mRNA sequence /clone=CAYY4734 /clone_end=5' /gb=FC366443
Ppa.8175
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_175642) mRNA, complete cds /cds=p(1,852) /gb=XM_001754399

Domain Architecture

Myb_DNA-binding PF00249 AT5G45580.1
DomainStartEndBit scoreE-value
Myb_DNA-binding96044.14.8e-10
G2-like1260701.3e-20

Sequences