Plant Transcription factor database - CTBE
version: 3.0

Gene model: AT5G06800.1

Identification

Species:
Arabidopsis thaliana
Locus
AT5G06800
Gene model
AT5G06800.1
Description
myb family transcription factor
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

487493 Score: 1

Populus trichocarpa

653502 Score: 1

Expression data

Expressed Sequence Tags

At.40835
Arabidopsis thaliana At3g04450 mRNA for putative transfactor, complete cds, clone: RAFL19-89-P11 /cds=p(537,1745) /gb=AK118630
At.4525
Arabidopsis thaliana PHR1 (PHOSPHATE STARVATION RESPONSE 1); transcription factor (PHR1) mRNA, complete cds /cds=p(156,1385) /gb=NM_119003
At.50439
Arabidopsis thaliana myb family transcription factor (AT5G06800) mRNA, complete cds /cds=p(213,1340) /gb=NM_120763
Mtr.10993
Medicago truncatula clone MTYFD_FE_FF_FG1G-F-19 unknown mRNA /cds=p(94,1086) /gb=BT052374
Os.13978
Oryza sativa Japonica Group cDNA clone:J023012H08, full insert sequence /cds=p(326,1099) /gb=AK069306
Os.24994
Oryza sativa Japonica Group cDNA clone:001-116-C05, full insert sequence /cds=p(352,1638) /gb=AK063486
Os.28062
Oryza sativa Japonica Group cDNA clone:J013160O05, full insert sequence /cds=p(196,1476) /gb=AK100065
Pba.2360
WS0194.B21_B04 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS0194_B04 3', mRNA sequence /clone=WS0194_B04 /clone_end=3' /gb=CV231285
Ppa.13177
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_233986) mRNA, complete cds /cds=p(1,1566) /gb=XM_001769164
Ppa.2695
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_163773) mRNA, complete cds /cds=p(224,1507) /gb=XM_001763286
Pth.2360
Populus trichocarpa clone WS0126_F15 unknown mRNA /cds=p(93,809) /gb=EF147970
Vvi.12508
WIN022.C21_K17 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA clone WIN022_K17 3', mRNA sequence /clone=WIN022_K17 /clone_end=3' /gb=EC923787
Vvi.20324
WIN0545.C21_J17 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0545_J17 3', mRNA sequence /clone=WIN0545_J17 /clone_end=3' /gb=EC949094

Domain Architecture

Myb_DNA-binding PF00249 AT5G06800.1
DomainStartEndBit scoreE-value
Myb_DNA-binding19424540.94.4e-09
G2-like197245648e-19

Sequences