Plant Transcription factor database - CTBE
version: 3.0

Gene model: AT5G05090.1

Identification

Species:
Arabidopsis thaliana
Locus
AT5G05090
Gene model
AT5G05090.1
Description
myb family transcription factor
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

908412 Score: 1

Sorghum bicolor

5009650 Score: 1

Zea mays

AC190801.3_FGP028 Score: 1
GRMZM2G012637_P01 Score: 1
GRMZM2G151823_P01 Score: 1
GRMZM2G170324_P01 Score: 1

Arabidopsis thaliana

AT3G10760.1 Score: 1
AT5G05090.1 Score: 1

Expression data

Expressed Sequence Tags

At.27776
Arabidopsis thaliana myb family transcription factor (AT2G40970) mRNA, complete cds /cds=p(178,924) /gb=NM_129662
At.33034
Arabidopsis thaliana myb family transcription factor (AT5G05090) mRNA, complete cds /cds=p(162,962) /gb=NM_120591
At.39869
Arabidopsis thaliana myb family transcription factor (AT3G10760) mRNA, complete cds /cds=p(235,1242) /gb=NM_111913
Os.21034
Oryza sativa (japonica cultivar-group) Os05g0412000 (Os05g0412000) mRNA, complete cds /cds=p(1,996) /gb=NM_001062074

Domain Architecture

Myb_DNA-binding PF00249 AT5G05090.1
DomainStartEndBit scoreE-value
Myb_DNA-binding8313343.57.7e-10
G2-like8613398.24.2e-29

Sequences