Plant Transcription factor database - CTBE
version: 3.0

Gene model: AT4G28610.1

Identification

Species:
Arabidopsis thaliana
Locus
AT4G28610
Gene model
AT4G28610.1
Gene names and synonyms
ATPHR1 iHOP
PHR1 iHOP
Description
PHR1 (PHOSPHATE STARVATION RESPONSE 1); transcription factor
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

491902 Score: 1

Chlorella sp. NC64A

145560 Score: 1

Oryza sativa subsp. japonica

LOC_Os07g25710.2 Score: 1
LOC_Os07g25710.1 Score: 0.974
LOC_Os07g25710.3 Score: 0.974

Populus trichocarpa

711538 Score: 1

Sorghum bicolor

4999599 Score: 1

Zea mays

GRMZM2G162409_P03 Score: 1
GRMZM2G162409_P01 Score: 0.96
GRMZM2G162409_P02 Score: 0.96

Expression data

Expressed Sequence Tags

At.11993
Arabidopsis thaliana myb family transcription factor (AT3G13040) mRNA, complete cds /cds=p(259,1608) /gb=NM_112141
At.26183
Arabidopsis thaliana myb family transcription factor (AT5G29000) mRNA, complete cds /cds=p(47,1288) /gb=NM_122784
At.4525
Arabidopsis thaliana PHR1 (PHOSPHATE STARVATION RESPONSE 1); transcription factor (PHR1) mRNA, complete cds /cds=p(156,1385) /gb=NM_119003
At.50439
Arabidopsis thaliana myb family transcription factor (AT5G06800) mRNA, complete cds /cds=p(213,1340) /gb=NM_120763
Os.14719
Oryza sativa Japonica Group cDNA clone:J033123H06, full insert sequence /cds=p(314,1180) /gb=AK103241
Os.24994
Oryza sativa Japonica Group cDNA clone:001-116-C05, full insert sequence /cds=p(352,1638) /gb=AK063486
Os.47566
Oryza sativa (japonica cultivar-group) Os08g0346500 (Os08g0346500) mRNA, complete cds /cds=p(1,924) /gb=NM_001068140
Ppa.4715
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_170944) mRNA, complete cds /cds=p(1,2388) /gb=XM_001779951
Pth.2360
Populus trichocarpa clone WS0126_F15 unknown mRNA /cds=p(93,809) /gb=EF147970
Sbi.14619
GABR1_37_H02.g1_A002 GA- or brassinolide-treated seedlings Sorghum bicolor cDNA clone GABR1_37_H02_A002 5', mRNA sequence /clone=GABR1_37_H02_A002 /clone_end=5' /gb=CX618130 /gi=57816917
Vvi.12508
WIN022.C21_K17 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA clone WIN022_K17 3', mRNA sequence /clone=WIN022_K17 /clone_end=3' /gb=EC923787

Domain Architecture

Myb_DNA-binding PF00249 AT4G28610.1
DomainStartEndBit scoreE-value
Myb_DNA-binding22727842.41.6e-09
G2-like23027869.32.1e-20

Sequences