Plant Transcription factor database - CTBE
version: 3.0

Gene model: AT4G13640.1

Identification

Species:
Arabidopsis thaliana
Locus
AT4G13640
Gene model
AT4G13640.1
Gene names and synonyms
UNE16 iHOP
Description
UNE16 (unfertilized embryo sac 16); transcription factor
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT4G13640.1 Score: 1
AT4G13640.2 Score: 0.986

Micromonas pusilla CCMP1545

61323 Score: 1

Arabidopsis thaliana

AT3G04030.3 Score: 1
AT4G13640.1 Score: 1
AT3G04030.2 Score: 0.987
AT4G13640.2 Score: 0.986
AT3G04030.1 Score: 0.972

Arabidopsis thaliana

AT3G24120.1 Score: 1
AT4G13640.1 Score: 1
AT4G13640.2 Score: 1
AT3G24120.2 Score: 0.986

Zea mays

GRMZM2G064197_P01 Score: 1
GRMZM2G064197_P03 Score: 1

Expression data

Expressed Sequence Tags

At.22199
Arabidopsis thaliana putative protein (At4g13640) mRNA, complete cds /cds=p(634,1083) /gb=AY081310
At.26588
Arabidopsis thaliana myb family transcription factor (AT3G24120) mRNA, complete cds /cds=p(168,1064) /gb=NM_202627
Hv.12075
HV_CEb0020G12f Hordeum vulgare seedling green leaf EST library HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEb0020G12f, mRNA sequence /clone=HV_CEb0020G12f /gb=BE558795
Mtr.19692
Medicago truncatula clone MTYF5_F6_F7_F81G-N-14 unknown mRNA /cds=p(177,1121) /gb=BT051559
Mtr.22841
Medicago truncatula clone MTYFD_FE_FF_FG1G-O-4 unknown mRNA /cds=m(89,1126) /gb=BT052638
Os.15464
RECm0256 A normalized whole-life-cycle cDNA library of rice Oryza sativa (indica cultivar-group) cDNA clone BI027I04, BI075P20, BI106D17, BI125D14 5', mRNA sequence /clone=BI027I04,_BI075P20,_BI106D17,_BI125D14 /clone_end=5' /gb=CX099620
Os.50003
Oryza sativa Japonica Group cDNA clone:002-117-C12, full insert sequence /gb=AK119588
Os.51525
Oryza sativa Japonica Group cDNA clone:J023074M06, full insert sequence /gb=AK100282
Os.79800
Oryza sativa (japonica cultivar-group) Os02g0174000 (Os02g0174000) mRNA, complete cds /cds=p(1,1152) /gb=NM_001052580
Pba.1872
F009P52.3pR Populus flower cDNA library Populus trichocarpa cDNA clone F009P52 3', mRNA sequence /clone=F009P52 /clone_end=3' /gb=CK090502
Pba.338
WS02520.B21_D16 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02520_D16 3', mRNA sequence /clone=WS02520_D16 /clone_end=3' /gb=DT482586
Ppa.20051
CAYY4734.fwd CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens subsp. patens cDNA clone CAYY4734 5', mRNA sequence /clone=CAYY4734 /clone_end=5' /gb=FC366443
Ppa.8175
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_175642) mRNA, complete cds /cds=p(1,852) /gb=XM_001754399
Pth.16392
WS0197.B21_G16 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS0197_G16 3', mRNA sequence /clone=WS0197_G16 /clone_end=3' /gb=CV232380
Pth.1872
Populus trichocarpa clone WS01214_H04 unknown mRNA /cds=p(155,1084) /gb=EF146817
Ptp.4282
T063H04 Populus apical shoot cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU834640
Sbi.8915
GABR1_14_D04.g1_A002 GA- or brassinolide-treated seedlings Sorghum bicolor cDNA clone GABR1_14_D04_A002 5', mRNA sequence /clone=GABR1_14_D04_A002 /clone_end=5' /gb=CX614526 /gi=57813270
Vvi.19363
VVI009B10_584200 CabSau Flower Stage 12 (FLOu0012) Vitis vinifera cDNA clone VVI009B10 5, mRNA sequence /clone=VVI009B10 /clone_end=5' /gb=DT017180
Vvi.3202
WIN1149.C21_O01 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1149_O01 3', mRNA sequence /clone=WIN1149_O01 /clone_end=3' /gb=EC993936

Domain Architecture

Myb_DNA-binding PF00249 AT4G13640.1
DomainStartEndBit scoreE-value
Myb_DNA-binding399042.61.4e-09
G2-like429068.92.8e-20

Sequences