Gene model: AT3G46640.2

Species: Arabidopsis thaliana Locus AT3G46640 Gene model AT3G46640.2 Gene names and synonyms LUX iHOP PCL1 iHOP Description PCL1 (PHYTOCLOCK 1); DNA binding Family G2-like 3D structure (top 5) 1IRZ
	PDB entry: 1IRZ

• KEGG
• TAIR

• GabiPD
• PhosPhAT
• ProMEX

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

485038 Score: 1

Arabidopsis thaliana

AT3G46640.1 Score: 1
AT3G46640.2 Score: 1

Arabidopsis thaliana

AT3G46640.1 Score: 1
AT3G46640.2 Score: 1

Carica papaya

evm.TU.supercontig_81.112 Score: 1

Physcomitrella patens

25200 Score: 1

Arabidopsis thaliana

AT3G46640.1 Score: 1
AT3G46640.2 Score: 1

Populus trichocarpa

203640 Score: 1

Arabidopsis thaliana

AT3G46640.1 Score: 1
AT3G46640.2 Score: 1

Selaginella moellendorffii

36646 Score: 1

Arabidopsis thaliana

AT3G46640.1 Score: 1
AT3G46640.2 Score: 1

Arabidopsis thaliana

AT3G46640.1 Score: 1
AT3G46640.2 Score: 1

Vitis vinifera

GSVIVP00024277001 Score: 1

Arabidopsis thaliana

AT3G46640.1 Score: 1
AT3G46640.2 Score: 1

Zea mays

GRMZM2G067702_P01 Score: 1

• AthaMap - TFBS in the promoter of this gene
• eFP Browser - Uni Toronto - Natural Variation
• MPSS data
• eFP Browser - Uni Toronto - Abiotic stresses
• eFP Browser - Uni Toronto - Developmental processes
• NCBI EST Profile Viewer (UniGene: At.29219)
• NCBI EST Profile Viewer (UniGene: At.47951)
• NCBI EST Profile Viewer (UniGene: Os.49746)
• NCBI EST Profile Viewer (UniGene: Pba.5228)
• NCBI EST Profile Viewer (UniGene: Pth.5228)
• NCBI EST Profile Viewer (UniGene: Sbi.15239)

At.29219

Arabidopsis thaliana myb family transcription factor (AT5G59570) mRNA, complete cds /cds=p(160,1056) /gb=NM_125349

At.47951

Arabidopsis thaliana PCL1 (PHYTOCLOCK 1); DNA binding (PCL1) mRNA, complete cds /cds=p(159,1130) /gb=NM_001035746

Os.49746

Oryza sativa (japonica cultivar-group) induced protein MgI1 mRNA, complete cds /cds=p(218,934) /gb=AY581256

Pba.5228

WS02531.B21_L06 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02531_L06 3', mRNA sequence /clone=WS02531_L06 /clone_end=3' /gb=DT486700

Pth.5228

WS02531.B21_L06 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02531_L06 3', mRNA sequence /clone=WS02531_L06 /clone_end=3' /gb=DT486700

Sbi.15239

RHOH1_23_G11.g3_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_23_G11_A002 5', mRNA sequence /clone=RHOH1_23_G11_A002 /clone_end=5' /gb=CN127582 /gi=45953733

protein sequence
transcript sequence