Plant Transcription factor database - CTBE
version: 3.0

Gene model: 880939

Identification

Species:
Arabidopsis lyrata
Gene model
880939
Description
Al_scaffold_0001_2706
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT1G25550.1 Score: 1

Populus trichocarpa

225637 Score: 1
419693 Score: 1

Arabidopsis lyrata

475994 Score: 1
880939 Score: 1

Vitis vinifera

GSVIVP00030296001 Score: 1

Expression data

Expressed Sequence Tags

At.25159
Arabidopsis thaliana myb family transcription factor (AT1G25550) mRNA, complete cds /cds=p(211,1245) /gb=NM_102366
At.27154
Arabidopsis thaliana myb family transcription factor (AT1G68670) mRNA, complete cds /cds=p(316,1380) /gb=NM_105539
Hv.11221
RUS75A02w HF Hordeum vulgare subsp. vulgare cDNA clone HF19D18, mRNA sequence /clone=HF19D18 /gb=FD524331
Vvi.24101
sT7aVVM002B15064 VVM Vitis vinifera cDNA clone VVM002B15064 5' similar to emb_CAO42100.1 unnamed protein product [Vitis vinifera]. Expect = 2e-128, mRNA sequence /clone=VVM002B15064 /clone_end=5' /gb=FC061778

Domain Architecture

G2-like G2-like 880939
DomainStartEndBit scoreE-value
Myb_DNA-binding21126236.41.2e-07
G2-like21426269.51.8e-20

Sequences