Plant Transcription factor database - CTBE
version: 3.0

Gene model: 590054

Identification

Species:
Populus trichocarpa
Gene model
590054
Description
eugene3.00290237
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

473414 Score: 1

Arabidopsis thaliana

AT1G32240.1 Score: 1

Carica papaya

evm.TU.supercontig_208.12 Score: 1

Populus trichocarpa

554056 Score: 1
590054 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g46940.1 Score: 1
LOC_Os08g06370.1 Score: 1

Sorghum bicolor

4979842 Score: 1

Populus trichocarpa

554056 Score: 1
590054 Score: 1

Vitis vinifera

GSVIVP00015692001 Score: 1

Expression data

Expressed Sequence Tags

At.25340
Arabidopsis thaliana KAN2 (KANADI 2); DNA binding / transcription factor (KAN2) mRNA, complete cds /cds=p(272,1438) /gb=NM_102957
Mtr.17243
EST611513 KVKC Medicago truncatula cDNA clone pKVKC-10F11, mRNA sequence /clone=pKVKC-10F11 /gb=BQ165644
Os.24481
Oryza sativa (japonica cultivar-group) Os08g0160300 (Os08g0160300) mRNA, complete cds /cds=p(1,1038) /gb=NM_001067582
Pba.6907
WS02536.B21_E12 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02536_E12 3', mRNA sequence /clone=WS02536_E12 /clone_end=3' /gb=DT488382
Pba.6982
WS02535.B21_K02 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02535_K02 3', mRNA sequence /clone=WS02535_K02 /clone_end=3' /gb=DT488145
Pth.6907
WS02536.B21_E12 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02536_E12 3', mRNA sequence /clone=WS02536_E12 /clone_end=3' /gb=DT488382
Pth.6982
WS02535.B21_K02 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02535_K02 3', mRNA sequence /clone=WS02535_K02 /clone_end=3' /gb=DT488145
Vvi.11829
S5B02829 Fruits 7-9 mm treated with GA3 (VvS5) Vitis vinifera cDNA clone S5B02829, mRNA sequence /clone=S5B02829 /gb=EE086713
Vvi.12238
WIN0560.C21_I20 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0560_I20 3', mRNA sequence /clone=WIN0560_I20 /clone_end=3' /gb=EC954053

Domain Architecture

Myb_DNA-binding PF00249 590054
DomainStartEndBit scoreE-value
Myb_DNA-binding20125242.91.2e-09
G2-like20425260.11.2e-17

Sequences