Plant Transcription factor database - CTBE
version: 3.0

Gene model: 560918

Identification

Species:
Populus trichocarpa
Gene model
560918
Description
eugene3.00060877
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Ostreococcus tauri

35984 Score: 1

Populus trichocarpa

419470 Score: 1
560918 Score: 1

Selaginella moellendorffii

57477 Score: 1

Vitis vinifera

GSVIVP00038886001 Score: 1

Expression data

Expressed Sequence Tags

Mtr.12360
AC2769 NOLLY Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=DY617082
Os.14719
Oryza sativa Japonica Group cDNA clone:J033123H06, full insert sequence /cds=p(314,1180) /gb=AK103241
Os.47566
Oryza sativa (japonica cultivar-group) Os08g0346500 (Os08g0346500) mRNA, complete cds /cds=p(1,924) /gb=NM_001068140
Os.5279
Oryza sativa Japonica Group cDNA clone:J013127L15, full insert sequence /cds=p(276,1715) /gb=AK067950
Ppa.2229
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_169970) mRNA, complete cds /cds=p(529,3219) /gb=XM_001777685
Ppa.4715
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_170944) mRNA, complete cds /cds=p(1,2388) /gb=XM_001779951

Domain Architecture

Myb_DNA-binding PF00249 560918
DomainStartEndBit scoreE-value
Myb_DNA-binding136444.63.6e-10
G2-like166468.92.7e-20

Sequences