Plant Transcription factor database - CTBE
version: 3.0

Gene model: 557338

Identification

Species:
Populus trichocarpa
Gene model
557338
Description
eugene3.00090598
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

474091 Score: 1

Populus trichocarpa

557338 Score: 1
827942 Score: 1

Carica papaya

evm.TU.supercontig_62.51 Score: 1

Populus trichocarpa

557338 Score: 1
827942 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g55590.1 Score: 1
LOC_Os12g39640.1 Score: 1

Sorghum bicolor

147132 Score: 1
5050489 Score: 1

Populus trichocarpa

557338 Score: 1
827942 Score: 1

Vitis vinifera

GSVIVP00036531001 Score: 1

Expression data

Expressed Sequence Tags

Pba.138
WS01230.BR_K12 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01230_K12 5', mRNA sequence /clone=WS01230_K12 /clone_end=5' /gb=DT474056
Pba.9452
WS01229.BR_I10 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01229_I10 5', mRNA sequence /clone=WS01229_I10 /clone_end=5' /gb=DT473394
Pth.138
Populus trichocarpa clone WS0123_L02 unknown mRNA /cds=p(142,807) /gb=EF147597
Pth.9452
Populus trichocarpa clone WS01229_I10 unknown mRNA /cds=p(71,1291) /gb=EF147219
Ptp.11825
G092P58.3pR Populus tension wood cDNA library Populus tremula x Populus tremuloides cDNA clone G092P58 3', mRNA sequence /clone=G092P58 /clone_end=3' /gb=CK092713
Vvi.15531
WIN026.TB24.1_C08 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA clone WIN026_C08 3', mRNA sequence /clone=WIN026_C08 /clone_end=3' /gb=EC924639
Vvi.19728
CSECS173G04_POSu0038 CabSau Berry Postveraison Stage 38 (POSu0038) Vitis vinifera cDNA clone CSECS173G04 3', mRNA sequence /clone=CSECS173G04 /clone_end=3' /gb=DV939966
Vvi.6387
WIN027.TB24.1_K06 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA clone WIN027_K06 3', mRNA sequence /clone=WIN027_K06 /clone_end=3' /gb=EC925069

Domain Architecture

Myb_DNA-binding PF00249 557338
DomainStartEndBit scoreE-value
Myb_DNA-binding263314391.7e-08
G2-like26631476.41.5e-22

Sequences