Plant Transcription factor database - CTBE
version: 3.0

Gene model: 5061562

Identification

Species:
Sorghum bicolor
Gene model
5061562
Description
Sb10g008400
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

480887 Score: 1

Sorghum bicolor

5052336 Score: 1
5061562 Score: 1

Arabidopsis thaliana

AT2G20570.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os06g24070.1 Score: 1

Physcomitrella patens

178653 Score: 1

Populus trichocarpa

654401 Score: 1

Vitis vinifera

GSVIVP00018643001 Score: 1

Zea mays

GRMZM2G022333_P02 Score: 1
GRMZM2G026833_P02 Score: 1
GRMZM2G022333_P01 Score: 0.984
GRMZM2G026833_P01 Score: 0.984

Expression data

Expressed Sequence Tags

At.19638
Arabidopsis thaliana GLK2 (GOLDEN2-LIKE 2); DNA binding / transcription factor (GLK2) mRNA, complete cds /cds=p(67,1227) /gb=NM_123786
Os.3340
Oryza sativa putative transcription factor OsGLK1 (Glk1) mRNA, complete cds /cds=p(215,1582) /gb=AF318581
Sbi.8118
WOUND1_82_C03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_82_C03_A002 5', mRNA sequence /clone=WOUND1_82_C03_A002 /clone_end=5' /gb=CN152516 /gi=45996581

Domain Architecture

Myb_DNA-binding PF00249 5061562
DomainStartEndBit scoreE-value
Myb_DNA-binding191241409.3e-09
G2-like194241125.62.4e-37

Sequences