Plant Transcription factor database - CTBE
version: 3.0

Gene model: 442062

Identification

Species:
Selaginella moellendorffii
Gene model
442062
Description
estExt_fgenesh2_pg.C_210180
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Selaginella moellendorffii

442062 Score: 1
57477 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g12770.1 Score: 1
LOC_Os09g12770.2 Score: 1

Physcomitrella patens

233986 Score: 1

Sorghum bicolor

5051025 Score: 1

Vitis vinifera

GSVIVP00023376001 Score: 1

Zea mays

GRMZM2G143881_P01 Score: 1
GRMZM2G173943_P02 Score: 1

Expression data

Expressed Sequence Tags

At.26183
Arabidopsis thaliana myb family transcription factor (AT5G29000) mRNA, complete cds /cds=p(47,1288) /gb=NM_122784
At.40835
Arabidopsis thaliana At3g04450 mRNA for putative transfactor, complete cds, clone: RAFL19-89-P11 /cds=p(537,1745) /gb=AK118630
Hv.9076
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf91j11, mRNA sequence /gb=AK250795
Mtr.10993
Medicago truncatula clone MTYFD_FE_FF_FG1G-F-19 unknown mRNA /cds=p(94,1086) /gb=BT052374
Mtr.12360
AC2769 NOLLY Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=DY617082
Os.13978
Oryza sativa Japonica Group cDNA clone:J023012H08, full insert sequence /cds=p(326,1099) /gb=AK069306
Os.14719
Oryza sativa Japonica Group cDNA clone:J033123H06, full insert sequence /cds=p(314,1180) /gb=AK103241
Os.47566
Oryza sativa (japonica cultivar-group) Os08g0346500 (Os08g0346500) mRNA, complete cds /cds=p(1,924) /gb=NM_001068140
Os.52219
Oryza sativa Japonica Group cDNA clone:J013037C19, full insert sequence /cds=p(203,1606) /gb=AK065704
Os.5279
Oryza sativa Japonica Group cDNA clone:J013127L15, full insert sequence /cds=p(276,1715) /gb=AK067950
Os.7599
Oryza sativa Japonica Group cDNA clone:J023114F03, full insert sequence /cds=p(162,1151) /gb=AK071731
Pba.1402
WS02519.BR_I07 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02519_I07 5', mRNA sequence /clone=WS02519_I07 /clone_end=5' /gb=DT477286
Ppa.2229
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_169970) mRNA, complete cds /cds=p(529,3219) /gb=XM_001777685
Ppa.2695
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_163773) mRNA, complete cds /cds=p(224,1507) /gb=XM_001763286
Ppa.4715
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_170944) mRNA, complete cds /cds=p(1,2388) /gb=XM_001779951
Sbi.14619
GABR1_37_H02.g1_A002 GA- or brassinolide-treated seedlings Sorghum bicolor cDNA clone GABR1_37_H02_A002 5', mRNA sequence /clone=GABR1_37_H02_A002 /clone_end=5' /gb=CX618130 /gi=57816917

Domain Architecture

G2-like G2-like 442062
DomainStartEndBit scoreE-value
Myb_DNA-binding7312435.62e-07
G2-like7612463.61e-18

Sequences