Plant Transcription factor database - CTBE
version: 3.0

Gene model: 423600

Identification

Species:
Populus trichocarpa
Gene model
423600
Description
gw1.29.112.1
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os02g47190.1 Score: 1

Sorghum bicolor

4985200 Score: 1
5055745 Score: 1

Populus trichocarpa

423600 Score: 1
554102 Score: 1

Expression data

Expressed Sequence Tags

At.26588
Arabidopsis thaliana myb family transcription factor (AT3G24120) mRNA, complete cds /cds=p(168,1064) /gb=NM_202627
Mtr.19692
Medicago truncatula clone MTYF5_F6_F7_F81G-N-14 unknown mRNA /cds=p(177,1121) /gb=BT051559
Mtr.22841
Medicago truncatula clone MTYFD_FE_FF_FG1G-O-4 unknown mRNA /cds=m(89,1126) /gb=BT052638
Os.24699
Oryza sativa Japonica Group cDNA clone:001-028-A10, full insert sequence /cds=p(432,1298) /gb=AK059448
Os.50003
Oryza sativa Japonica Group cDNA clone:002-117-C12, full insert sequence /gb=AK119588
Os.52524
Oryza sativa Japonica Group cDNA clone:J013112H14, full insert sequence /gb=AK067645
Os.79800
Oryza sativa (japonica cultivar-group) Os02g0174000 (Os02g0174000) mRNA, complete cds /cds=p(1,1152) /gb=NM_001052580
Ppa.20051
CAYY4734.fwd CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens subsp. patens cDNA clone CAYY4734 5', mRNA sequence /clone=CAYY4734 /clone_end=5' /gb=FC366443
Vvi.19118
WIN0549.C21_H07 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0549_H07 3', mRNA sequence /clone=WIN0549_H07 /clone_end=3' /gb=EC950374

Domain Architecture

Myb_DNA-binding PF00249 423600
DomainStartEndBit scoreE-value
Myb_DNA-binding65743.57.5e-10
G2-like95767.76.2e-20

Sequences