Plant Transcription factor database - CTBE
version: 3.0

Gene model: 356449

Identification

Species:
Arabidopsis lyrata
Gene model
356449
Description
fgenesh1_pg.C_scaffold_8000236
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT5G45580.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g47190.1 Score: 1

Populus trichocarpa

554102 Score: 1

Sorghum bicolor

5055745 Score: 1

Vitis vinifera

GSVIVP00038751001 Score: 1

Zea mays

GRMZM2G125704_P02 Score: 1
GRMZM2G151987_P02 Score: 1

Expression data

Expressed Sequence Tags

At.26588
Arabidopsis thaliana myb family transcription factor (AT3G24120) mRNA, complete cds /cds=p(168,1064) /gb=NM_202627
At.50506
Arabidopsis thaliana transcription factor (AT5G45580) mRNA, complete cds /cds=p(46,840) /gb=NM_123926
Os.15464
RECm0256 A normalized whole-life-cycle cDNA library of rice Oryza sativa (indica cultivar-group) cDNA clone BI027I04, BI075P20, BI106D17, BI125D14 5', mRNA sequence /clone=BI027I04,_BI075P20,_BI106D17,_BI125D14 /clone_end=5' /gb=CX099620
Os.24699
Oryza sativa Japonica Group cDNA clone:001-028-A10, full insert sequence /cds=p(432,1298) /gb=AK059448
Os.50003
Oryza sativa Japonica Group cDNA clone:002-117-C12, full insert sequence /gb=AK119588
Os.79800
Oryza sativa (japonica cultivar-group) Os02g0174000 (Os02g0174000) mRNA, complete cds /cds=p(1,1152) /gb=NM_001052580

Domain Architecture

G2-like G2-like 356449
DomainStartEndBit scoreE-value
Myb_DNA-binding257645.12.7e-10
G2-like2876701.3e-20

Sequences