Plant Transcription factor database - CTBE
version: 3.0

Gene model: 25200

Identification

Species:
Physcomitrella patens
Gene model
25200
Description
gw1.27.80.1
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Physcomitrella patens

25200 Score: 1
34063 Score: 1

Arabidopsis lyrata

485038 Score: 1
496092 Score: 1

Arabidopsis thaliana

AT3G46640.1 Score: 1
AT3G46640.2 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g74020.1 Score: 1

Vitis vinifera

GSVIVP00024277001 Score: 1

Physcomitrella patens

25200 Score: 1
34063 Score: 1

Zea mays

GRMZM2G067702_P01 Score: 1

Expression data

Expressed Sequence Tags

At.29219
Arabidopsis thaliana myb family transcription factor (AT5G59570) mRNA, complete cds /cds=p(160,1056) /gb=NM_125349
At.39869
Arabidopsis thaliana myb family transcription factor (AT3G10760) mRNA, complete cds /cds=p(235,1242) /gb=NM_111913
At.47951
Arabidopsis thaliana PCL1 (PHYTOCLOCK 1); DNA binding (PCL1) mRNA, complete cds /cds=p(159,1130) /gb=NM_001035746
Ppa.9533
DC918153 ppaa full-length cDNA library; antheridia and archgonia Physcomitrella patens subsp. patens cDNA clone ppaa8g23 3', mRNA sequence /clone=ppaa8g23 /clone_end=3' /gb=DC918153

Domain Architecture

Myb_DNA-binding PF00249 25200
DomainStartEndBit scoreE-value
Myb_DNA-binding13418442.21.8e-09
G2-like137184100.77.2e-30

Sequences