Plant Transcription factor database - CTBE
version: 3.0

Gene model: 225637

Identification

Species:
Populus trichocarpa
Gene model
225637
Description
gw1.X.334.1
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Populus trichocarpa

225637 Score: 1
419693 Score: 1

Arabidopsis lyrata

475994 Score: 1
880939 Score: 1

Populus trichocarpa

225637 Score: 1
419693 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g22020.1 Score: 1

Populus trichocarpa

225637 Score: 1
419693 Score: 1

Zea mays

GRMZM2G016370_P01 Score: 1
GRMZM2G024361_P01 Score: 1
GRMZM2G159119_P01 Score: 1
GRMZM2G171025_P01 Score: 1

Expression data

Expressed Sequence Tags

At.20366
Arabidopsis thaliana At1g13300/T6J4_6 mRNA, complete cds /cds=p(88,1122) /gb=AF367336
At.25159
Arabidopsis thaliana myb family transcription factor (AT1G25550) mRNA, complete cds /cds=p(211,1245) /gb=NM_102366
At.27154
Arabidopsis thaliana myb family transcription factor (AT1G68670) mRNA, complete cds /cds=p(316,1380) /gb=NM_105539
At.37325
Arabidopsis thaliana clone 157740 mRNA, complete sequence /cds=p(91,1146) /gb=AY085570
Vvi.24101
sT7aVVM002B15064 VVM Vitis vinifera cDNA clone VVM002B15064 5' similar to emb_CAO42100.1 unnamed protein product [Vitis vinifera]. Expect = 2e-128, mRNA sequence /clone=VVM002B15064 /clone_end=5' /gb=FC061778

Domain Architecture

Myb_DNA-binding PF00249 225637
DomainStartEndBit scoreE-value
Myb_DNA-binding22627732.31.8e-06
G2-like22927769.81.4e-20

Sequences