Plant Transcription factor database - CTBE
version: 3.0

Gene model: 215873

Identification

Species:
Populus trichocarpa
Gene model
215873
Description
gw1.VII.178.1
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

478672 Score: 1

Arabidopsis thaliana

AT3G13040.1 Score: 1
AT3G13040.2 Score: 1

Micromonas sp. RCC299

60184 Score: 1

Selaginella moellendorffii

423505 Score: 1

Expression data

Expressed Sequence Tags

At.11993
Arabidopsis thaliana myb family transcription factor (AT3G13040) mRNA, complete cds /cds=p(259,1608) /gb=NM_112141
At.4525
Arabidopsis thaliana PHR1 (PHOSPHATE STARVATION RESPONSE 1); transcription factor (PHR1) mRNA, complete cds /cds=p(156,1385) /gb=NM_119003
Hv.9076
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf91j11, mRNA sequence /gb=AK250795
Mtr.12360
AC2769 NOLLY Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=DY617082
Os.14719
Oryza sativa Japonica Group cDNA clone:J033123H06, full insert sequence /cds=p(314,1180) /gb=AK103241
Os.24994
Oryza sativa Japonica Group cDNA clone:001-116-C05, full insert sequence /cds=p(352,1638) /gb=AK063486
Os.28062
Oryza sativa Japonica Group cDNA clone:J013160O05, full insert sequence /cds=p(196,1476) /gb=AK100065
Os.52219
Oryza sativa Japonica Group cDNA clone:J013037C19, full insert sequence /cds=p(203,1606) /gb=AK065704
Os.5279
Oryza sativa Japonica Group cDNA clone:J013127L15, full insert sequence /cds=p(276,1715) /gb=AK067950
Pba.1402
WS02519.BR_I07 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02519_I07 5', mRNA sequence /clone=WS02519_I07 /clone_end=5' /gb=DT477286
Ppa.13177
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_233986) mRNA, complete cds /cds=p(1,1566) /gb=XM_001769164
Ppa.4715
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_170944) mRNA, complete cds /cds=p(1,2388) /gb=XM_001779951
Ptp.948
C023P71.3pR Populus strain T89 leaves Populus tremula x Populus tremuloides cDNA clone C023P71 3', mRNA sequence /clone=C023P71 /clone_end=3' /gb=CK089647
Vvi.12508
WIN022.C21_K17 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA clone WIN022_K17 3', mRNA sequence /clone=WIN022_K17 /clone_end=3' /gb=EC923787
Vvi.19331
WIN061.C21_I04 Cab Sauv seed normalized (WIN06) Vitis vinifera cDNA clone WIN061_I04 3', mRNA sequence /clone=WIN061_I04 /clone_end=3' /gb=EC957036

Domain Architecture

Myb_DNA-binding PF00249 215873
DomainStartEndBit scoreE-value
Myb_DNA-binding17222345.51.9e-10
G2-like17522378.82.8e-23

Sequences