Plant Transcription factor database - CTBE
version: 3.0

Gene model: 172570

Identification

Species:
Populus trichocarpa
Gene model
172570
Description
gw1.I.1170.1
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.29219
Arabidopsis thaliana myb family transcription factor (AT5G59570) mRNA, complete cds /cds=p(160,1056) /gb=NM_125349
At.33034
Arabidopsis thaliana myb family transcription factor (AT5G05090) mRNA, complete cds /cds=p(162,962) /gb=NM_120591
At.39869
Arabidopsis thaliana myb family transcription factor (AT3G10760) mRNA, complete cds /cds=p(235,1242) /gb=NM_111913
At.47951
Arabidopsis thaliana PCL1 (PHYTOCLOCK 1); DNA binding (PCL1) mRNA, complete cds /cds=p(159,1130) /gb=NM_001035746
Os.49746
Oryza sativa (japonica cultivar-group) induced protein MgI1 mRNA, complete cds /cds=p(218,934) /gb=AY581256
Sbi.15239
RHOH1_23_G11.g3_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_23_G11_A002 5', mRNA sequence /clone=RHOH1_23_G11_A002 /clone_end=5' /gb=CN127582 /gi=45953733

Domain Architecture

Myb_DNA-binding PF00249 172570
DomainStartEndBit scoreE-value
Myb_DNA-binding10415435.52e-07
G2-like10715490.58.4e-27

Sequences