Plant Transcription factor database - CTBE
version: 3.0

Gene model: 163773

Identification

Species:
Physcomitrella patens
Gene model
163773
Description
estExt_fgenesh1_pg.C_600033
Family
G2-like
3D structure (top 5)
1IRZ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

478672 Score: 1

Arabidopsis thaliana

AT5G29000.2 Score: 1

Physcomitrella patens

163773 Score: 1
173556 Score: 1

Populus trichocarpa

711538 Score: 1
826090 Score: 1

Vitis vinifera

GSVIVP00028522001 Score: 1

Expression data

Expressed Sequence Tags

At.4525
Arabidopsis thaliana PHR1 (PHOSPHATE STARVATION RESPONSE 1); transcription factor (PHR1) mRNA, complete cds /cds=p(156,1385) /gb=NM_119003
Mtr.10993
Medicago truncatula clone MTYFD_FE_FF_FG1G-F-19 unknown mRNA /cds=p(94,1086) /gb=BT052374
Mtr.12360
AC2769 NOLLY Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=DY617082
Os.13978
Oryza sativa Japonica Group cDNA clone:J023012H08, full insert sequence /cds=p(326,1099) /gb=AK069306
Os.14719
Oryza sativa Japonica Group cDNA clone:J033123H06, full insert sequence /cds=p(314,1180) /gb=AK103241
Os.47566
Oryza sativa (japonica cultivar-group) Os08g0346500 (Os08g0346500) mRNA, complete cds /cds=p(1,924) /gb=NM_001068140
Os.7599
Oryza sativa Japonica Group cDNA clone:J023114F03, full insert sequence /cds=p(162,1151) /gb=AK071731
Pba.1402
WS02519.BR_I07 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02519_I07 5', mRNA sequence /clone=WS02519_I07 /clone_end=5' /gb=DT477286
Ppa.13177
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_233986) mRNA, complete cds /cds=p(1,1566) /gb=XM_001769164
Ppa.17871
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_164684) mRNA, complete cds /cds=p(1,3096) /gb=XM_001765235
Ppa.2229
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_169970) mRNA, complete cds /cds=p(529,3219) /gb=XM_001777685
Ppa.23839
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_99470) mRNA, complete cds /cds=p(1,2343) /gb=XM_001784095
Ppa.2695
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_163773) mRNA, complete cds /cds=p(224,1507) /gb=XM_001763286
Ppa.3238
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_171678) mRNA, complete cds /cds=p(1,2136) /gb=XM_001781505
Ppa.4715
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_170944) mRNA, complete cds /cds=p(1,2388) /gb=XM_001779951
Ppa.9887
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_173556) mRNA, complete cds /cds=p(1,1842) /gb=XM_001785555
Pth.2360
Populus trichocarpa clone WS0126_F15 unknown mRNA /cds=p(93,809) /gb=EF147970
Sbi.14619
GABR1_37_H02.g1_A002 GA- or brassinolide-treated seedlings Sorghum bicolor cDNA clone GABR1_37_H02_A002 5', mRNA sequence /clone=GABR1_37_H02_A002 /clone_end=5' /gb=CX618130 /gi=57816917

Domain Architecture

Myb_DNA-binding PF00249 163773
DomainStartEndBit scoreE-value
Myb_DNA-binding13118242.12e-09
G2-like13418265.23.7e-19

Sequences